Gene Pden_5109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_5109 
Symbol 
ID4583670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp623349 
End bp624674 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content66% 
IMG OID639772412 
Productmajor facilitator transporter 
Protein accessionYP_918865 
Protein GI119387831 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACAT CCTCCTCCAC GCCCGCCGTG CAATCGGCCG TCCCGTCAGC GCATGGCCAC 
CACAGGGTTT CGCCCTCGGA TGTCGCCGTG GGCGTCATCA TCGGGCGCGC TTCGGAATTC
TTCGATTTCT TCGTCTTTGC CATCGCTTCG GTGATCGTCT TTCCGCAGCG GATCTTTCCC
TTCACCGATC CGCTGACCGG GACGCTCTTG TCATTCGCGC TGCTGGCGCT GGCCTTCGTT
GCCCGGCCGC TGGGCAGTGC GCTGTTCATG AGCATCGACC GCCGCCACGG GCGCGTCACC
AAGCTGACGG CGGCGCTGTT CCTGATGGGG ACCGCGACCG TCGCCATGGG CCTGATCCCC
AGCTATGAGA ACGTGGGCGG CTGGGCCGTC GTCATCCTGG CCGTGCTGCG AATCGCGCAG
GGGCTGGCGC TGGGGGGTGC CTGGGACGGC ATGCCCTCGC TTCTGGCGCT GACGGCGCCG
CGCAGCCGCC GCGGCTTTTA CGCCATGGTG CCACAGCTTG GCGCGCCCAT CGGGCTGATC
GTCGCCAGCC TGCTTTTCGC CTATCTGGCG GCCAACCTGA CCGCGCAGGA CTTCCTGGAC
TGGGGCTGGC GCTATCCGTT CTTCGTCGCC TTCTCGGTCA ACGTGGTGGC GCTGTTCGCG
CGGCTGCGCA TCGTCGCGAC CGAGGAATTC GCCGAGCTTT TCGAATCGCG CGAACTCCAG
CCGACCCGCA TCGGCAAGAC CCTGCGCGAG GATGGCGGCG CGATCCTCAT CGGCATCTTC
GTGCCGCTGG CCAGTTTCGC CATGTTCCAT ATGGTCACGG TCTATCCGCT GTCCTGGATC
TATCTCTACA CAGACGAGAC GCTGCTCAGC TTCCTGATCA TCGAGGCGGT GGCGGCGACC
GGCGGCATCC TGGCCATCCT GCTGTCGGGC TGGCTGGCCG ACCGCATCGG GCGGCGCAAC
CTGCTGCTGG TGGGGGCATT GCTGATCGGC TGCTTTGCCG CGCTGGCGCC GCTGCTTCTG
TCGGCGGGCA AGACCGGCGA ACTGGTCTAC ATGATCGTCG GGTTCTTCAT CCTCGGCCTC
AGCTTCGGGC AAAGTTCCGG CGCGGTCGCC TCGCTGTTCG AGGCGCGCAA CCGCTATACC
GGCTCGGCCA TCGTCTCGGA TCTGGCCTGG ATGTTCGGCG CCGGCTTCGC GCCGCTGACC
GCGCTTTTGC TGTCGACCTG GCTGGGATTG TCGGCGGCGG GGCTTTACCT GCTTTCGGGT
GCGATCTGTT CGACCGTGGC CATCCTGCTG TCGGGCAAGC TGGAGTTCCG CGCCGCCGAA
CGCTAG
 
Protein sequence
MSTSSSTPAV QSAVPSAHGH HRVSPSDVAV GVIIGRASEF FDFFVFAIAS VIVFPQRIFP 
FTDPLTGTLL SFALLALAFV ARPLGSALFM SIDRRHGRVT KLTAALFLMG TATVAMGLIP
SYENVGGWAV VILAVLRIAQ GLALGGAWDG MPSLLALTAP RSRRGFYAMV PQLGAPIGLI
VASLLFAYLA ANLTAQDFLD WGWRYPFFVA FSVNVVALFA RLRIVATEEF AELFESRELQ
PTRIGKTLRE DGGAILIGIF VPLASFAMFH MVTVYPLSWI YLYTDETLLS FLIIEAVAAT
GGILAILLSG WLADRIGRRN LLLVGALLIG CFAALAPLLL SAGKTGELVY MIVGFFILGL
SFGQSSGAVA SLFEARNRYT GSAIVSDLAW MFGAGFAPLT ALLLSTWLGL SAAGLYLLSG
AICSTVAILL SGKLEFRAAE R