Gene Pden_5100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_5100 
Symbol 
ID4583661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp612229 
End bp613047 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content69% 
IMG OID639772403 
Productesterase/lipase-like protein 
Protein accessionYP_918856 
Protein GI119387822 
COG category[I] Lipid transport and metabolism 
COG ID[COG0657] Esterase/lipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACGG CGATCTATCG GGGGATGACC CGGCAGGAAC TGGACACGGC CTACAGCAAT 
ACCGGCAGGA TCGCGGATTT CCCGGCCTTG ATGCGGGATT TCCGCGCCCG CAGCGATGCG
TTCCATGCCG CGCATGACTG CCGGCGGGAT CTGCGCTATG GCCCCGGCGC GCGCCAGACC
TTCGACTGGT TAGCCAGCGG CCGGCCGGAT GCGCCGGTCT TCGTCTTCAT CCACGGCGGC
TATTGGCAGA GCTGCGTCAA GGAGGATTTC GCCTTCTGCG CCGCCGGTCC CCTGGCGCGC
GGCCATGACG TGATCCTGGC CGAATACACG CTGGCGCCCG AGGCTTCGAT GACGCAGATC
GTGGCCGAGA TCGGGCATCT GCTCGACCAT CTCGCGCCCC GGCTTGCCGG GCGGCGGCTT
TGCCTTGCCG GGCATTCCGC CGGCGGGCAT CTGGCGGCCA TGCATCGGGG CCACCCCGCC
GTAGGCTCGG TGCTGGCGAT CAGCGGGCTT TTCGACCTGG AGCCGATCGG CCTTGGCCAG
CTGAACGACA AGCTGCAACT GACCGAGGCC GAGATCGCCG CTTGCAGCCC GCAGCGGATC
ATCGCCCCCG GTGCGCCCAT GCTGGTGGCT GTCGGTGCCG GGGAACTGCC GGAACTGATC
CGGCAATCCG ACGACTATGC CGAAGCCTGC CGACAGGCGG GTGAGCGCGC GGTGCTGTTG
CACGTTCCGG GCTGCGACCA TTTCCAGGTG CTGGACGATC TGGCGGAACC GGCCGGGGCG
CAGTTGACCG CGTTGGCCGC GCTGGACATG CGGCCCTGA
 
Protein sequence
MATAIYRGMT RQELDTAYSN TGRIADFPAL MRDFRARSDA FHAAHDCRRD LRYGPGARQT 
FDWLASGRPD APVFVFIHGG YWQSCVKEDF AFCAAGPLAR GHDVILAEYT LAPEASMTQI
VAEIGHLLDH LAPRLAGRRL CLAGHSAGGH LAAMHRGHPA VGSVLAISGL FDLEPIGLGQ
LNDKLQLTEA EIAACSPQRI IAPGAPMLVA VGAGELPELI RQSDDYAEAC RQAGERAVLL
HVPGCDHFQV LDDLAEPAGA QLTALAALDM RP