| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_5099 |
|---|
| Symbol | |
|---|
| ID | 4583660 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008688 |
|---|
| Strand | + |
|---|
| Start bp | 611539 |
|---|
| End bp | 612228 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639772402 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_918855 |
|---|
| Protein GI | 119387821 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.999414 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCATC TTCTGGAATT GCGCGACGTG ACCGCATCCT ACGGCCCGGT GCAGGCGCTG
TTCGGCATCA CGCTGGACCT GGGCGAAGGC GAGGTCGTGG CGCTGATGGG CCGCAACGGC
ATGGGCAAGA CCACGACGAT CCGCTGCATC AGCCGCCTGA TGCCGCATTC CGCCGGCAGC
CTGCGCTTTG CGGGCCGGGA TGTCGCCGGC CTCTCGGCGC CCAAGGTGGC GCGGCTGGGC
GTCGGGTTGG TGCCCGAGGG GCGGCGCTGC TTCGCGCCGC TGACCGTGGC CGAGAACCTG
ACCGTTGCCG CCCGTCCCGG CCCCTGGGAC ATGGCGCGCG TCTGCGCTCT GTTTCCCCGC
CTGCAGGAAC GCATGGGCCA GATCGCGCGC ACGCTGTCGG GGGGCGAGCA GCAGATGCTG
GCCATCGGCC GGGCGCTGAT GACCAATCCG CGCCTGCTGG TGCTGGACGA GGCGACCGAG
GGCCTTGCCC CGGTCGTCCG GCAGGAGATC TGGGCCGGCG TGCGGCGGCT CAAGGCCGAG
GGGCTGTCGA TCCTGCTGGT GGACAAATCG CTCACCGAGA TCGCCTCGGT CGCCGACCGC
GCGGTGATCG TCGAGCGCGG TGCGACGGTC TGGCAGGGCG GCATCGCCGA TCTGACCTCG
GACCTGACCG ACCGCTATCT GGGGGTGTGA
|
|---|
| Protein sequence | MTHLLELRDV TASYGPVQAL FGITLDLGEG EVVALMGRNG MGKTTTIRCI SRLMPHSAGS
LRFAGRDVAG LSAPKVARLG VGLVPEGRRC FAPLTVAENL TVAARPGPWD MARVCALFPR
LQERMGQIAR TLSGGEQQML AIGRALMTNP RLLVLDEATE GLAPVVRQEI WAGVRRLKAE
GLSILLVDKS LTEIASVADR AVIVERGATV WQGGIADLTS DLTDRYLGV
|
|---|
| |