Gene Pden_5098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_5098 
Symbol 
ID4583659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp610778 
End bp611542 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content70% 
IMG OID639772401 
ProductABC transporter related 
Protein accessionYP_918854 
Protein GI119387820 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.688998 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGAGC CGAAACTCAA CGAACCCATC CTGGAGATCC GGGGCCTGCG CAAGTCCTTT 
GGCGCGCTGG TGGCGACCGA CGATGTCAGC CTGGACCTGC GCCCGGGCGA GATCCACGCC
CTGATCGGCC CGAACGGCGC CGGCAAGTCC ACGCTGATCA AGCAGATCGT CGGCGAGATC
CGGCCCGACG CCGGCACCAT CCGCTTCGAG GGGCAGGTGA TCGATACGCT GGACGCGGCG
GCGCGGGCGC GGCTGGGGCT GGCGCGCAGC TTCCAGGTGT CCTCGGTGAT CCCGGATTTC
ACCGTGCTGC AAAACGTCAT GCTGGCGGTG GCCGGGGCCA GCGGCGCGGT GTTCCGCTTT
CACCTGCCGG CGCTGGCCGA CCGCAAGCTG ACCGAACCCG CCCTGTTCCA TATCGAGCAG
GCGGGCCTTG CCGGGCGGCA TCTGGTCCCC GCCGCGACGC TTTCGCATGG CGAGCGCCGC
AAGCTGGAGA TCGCCATGGC GCTGGCCCTG CGCCCGCGCG CCTTCCTGCT GGACGAGCCC
ATGGCCGGCA TGGGGCTGGA GGGCGGGCGG CAGCTGACCG GCATCCTGGC CGAACTGCGC
AACGAGGCGC CGATCCTGCT GGTCGAGCAC GACATGGACG CGGTCTTTGC GCTGGCCGAC
CGCATCTCGG TGCTGGTCTA TGGCCGCATC ATCGCCACCG GCAGCGTGGC CGAGATCCGC
GCCAATCCCG AGGTGCGGCG TTCCTATCTG GGAGAGGACG CATGA
 
Protein sequence
MPEPKLNEPI LEIRGLRKSF GALVATDDVS LDLRPGEIHA LIGPNGAGKS TLIKQIVGEI 
RPDAGTIRFE GQVIDTLDAA ARARLGLARS FQVSSVIPDF TVLQNVMLAV AGASGAVFRF
HLPALADRKL TEPALFHIEQ AGLAGRHLVP AATLSHGERR KLEIAMALAL RPRAFLLDEP
MAGMGLEGGR QLTGILAELR NEAPILLVEH DMDAVFALAD RISVLVYGRI IATGSVAEIR
ANPEVRRSYL GEDA