Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_5098 |
Symbol | |
ID | 4583659 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008688 |
Strand | + |
Start bp | 610778 |
End bp | 611542 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639772401 |
Product | ABC transporter related |
Protein accession | YP_918854 |
Protein GI | 119387820 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.688998 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGAGC CGAAACTCAA CGAACCCATC CTGGAGATCC GGGGCCTGCG CAAGTCCTTT GGCGCGCTGG TGGCGACCGA CGATGTCAGC CTGGACCTGC GCCCGGGCGA GATCCACGCC CTGATCGGCC CGAACGGCGC CGGCAAGTCC ACGCTGATCA AGCAGATCGT CGGCGAGATC CGGCCCGACG CCGGCACCAT CCGCTTCGAG GGGCAGGTGA TCGATACGCT GGACGCGGCG GCGCGGGCGC GGCTGGGGCT GGCGCGCAGC TTCCAGGTGT CCTCGGTGAT CCCGGATTTC ACCGTGCTGC AAAACGTCAT GCTGGCGGTG GCCGGGGCCA GCGGCGCGGT GTTCCGCTTT CACCTGCCGG CGCTGGCCGA CCGCAAGCTG ACCGAACCCG CCCTGTTCCA TATCGAGCAG GCGGGCCTTG CCGGGCGGCA TCTGGTCCCC GCCGCGACGC TTTCGCATGG CGAGCGCCGC AAGCTGGAGA TCGCCATGGC GCTGGCCCTG CGCCCGCGCG CCTTCCTGCT GGACGAGCCC ATGGCCGGCA TGGGGCTGGA GGGCGGGCGG CAGCTGACCG GCATCCTGGC CGAACTGCGC AACGAGGCGC CGATCCTGCT GGTCGAGCAC GACATGGACG CGGTCTTTGC GCTGGCCGAC CGCATCTCGG TGCTGGTCTA TGGCCGCATC ATCGCCACCG GCAGCGTGGC CGAGATCCGC GCCAATCCCG AGGTGCGGCG TTCCTATCTG GGAGAGGACG CATGA
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Protein sequence | MPEPKLNEPI LEIRGLRKSF GALVATDDVS LDLRPGEIHA LIGPNGAGKS TLIKQIVGEI RPDAGTIRFE GQVIDTLDAA ARARLGLARS FQVSSVIPDF TVLQNVMLAV AGASGAVFRF HLPALADRKL TEPALFHIEQ AGLAGRHLVP AATLSHGERR KLEIAMALAL RPRAFLLDEP MAGMGLEGGR QLTGILAELR NEAPILLVEH DMDAVFALAD RISVLVYGRI IATGSVAEIR ANPEVRRSYL GEDA
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