| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_5080 |
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| Symbol | |
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| ID | 4583641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008688 |
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| Strand | + |
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| Start bp | 593534 |
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| End bp | 594190 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639772383 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_918836 |
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| Protein GI | 119387802 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGCG AATTTTCCTC TGCCGACCTG ATGTTCATCG TCTCGGCCGT CCGCTGGACG
CTGATCCTGT CCGCCATCGC CTTTCTGGGC GGCGCCCTGG GCGGGCTGGC GGTCGCCCTG
GCGCGGACCG CGCAGGGCAG GCTGCGTCGC CGCATCGCCG CCGGTTTCAT CCAGGTCTTT
CAGGGTACGC CGCTGCTGAT GCAGCTGTTC CTGGTCTATT TCGGCCTGGC CGTCGTCGGC
CTGCCCATCG ACCCGCTGCT GGCCGCGGCC GTGGCGCTGA CGCTGCATGC CAGCGCCTAT
CTGGGCGAGA TCTGGCGCGG CGCGATCGAG GCGGTGCCGC CGGGCCAGAC CGAGGCGGCC
ACGGCGCTGT CGCTGTCCTA CAAGGACCGG ATGCGCCATG TCGTCCTGCC GCAGGCGATG
CGGCTGGCGA CCGCGCCGAC CGTGGGCTTC CTGGTGCAGC TGATCAAGGG CACCTCGCTG
GCCTCGATCA TCGGCTTCAC CGAACTGACC CGTGCCGGTC AGATCATCAA CAACGCGACC
TTCAAGCCGT TCCTGGTCTT CGGCACGGTG GCCGCGCTCT ATTTCGTCCT GTGCTGGCCC
CTGTCGCTTC TGGCCCGGCG CATGGAGGCG CGCATGCGGC TGGCGGTCAC CCGCTAA
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| Protein sequence | MIREFSSADL MFIVSAVRWT LILSAIAFLG GALGGLAVAL ARTAQGRLRR RIAAGFIQVF
QGTPLLMQLF LVYFGLAVVG LPIDPLLAAA VALTLHASAY LGEIWRGAIE AVPPGQTEAA
TALSLSYKDR MRHVVLPQAM RLATAPTVGF LVQLIKGTSL ASIIGFTELT RAGQIINNAT
FKPFLVFGTV AALYFVLCWP LSLLARRMEA RMRLAVTR
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