| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_5078 |
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| Symbol | |
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| ID | 4583639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008688 |
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| Strand | + |
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| Start bp | 591783 |
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| End bp | 592796 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639772381 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_918834 |
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| Protein GI | 119387800 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0397942 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.741474 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCGCA AACGGGTCAC GCTGGACGAG GTCGCACGGA TCGCCGGCGT GTCGCGCGCC
ACCGTGTCGC TGGTCGTGCG CAAATCGCCC CTGGTCGCCG ATCACACCCG CGAAAAGGTC
GAGCAGGTGA TGGCCGACCT GGACTATGTC CGCGACATCG GCGCCGCGCG GCTGCGCAAC
AACAGCAGCC GCACCGTGGG GGTGATCGTG CCGAATCTGG TGAACTCGTT CTTCACCGAG
TTCCTGGCCG GCGTCGAGCG GGTGATGGGC GAGGACGACC GGGTCGTGCT GCTGGCCAAC
AGCCAGGACG ACCCACGGCG GCAGGAGGAG ATCCTGCAAC GCTTTCGCGG CCATGGCGTC
GATGGCGTGA TCCTGTGCCC GGCGGCGGGA ACAGACCCGG ACCTGCCCGC GCGCATGCGC
CGCTGGGGCC TGCCGGTCGT GCAATCGCTG CGCGAGATCG GCCGCGACGC CACCGATTAT
GCCGGCGCGG ATTATATCGA GGGCGTGCGG CTGGCCGTGC AGCATCTGGT CGGCCTCGGT
CGCCGCCGCA TCGCCTTCCT GTCGGTCAGC GCCCGCACCT CGGCGCGCGA AGAGCGGCTG
GCCGGCTTTG CCCGCGCCCT GGCCGAGACC GGCGCCACGG ATGCCGGCAT CGTCGAGGCC
GACCTGACCT GGGAAGGCGC GGCGCATTCG GCGGCCGAGG TGCTGGCGCT GCGAAGCCGG
CCCGAGGCGG TGCTGTGCTT CAACGACGTG CTTGCCGCCG GGTTGATGCT GGGCTTGCGC
CGCGCGGGGC TGGAACCGGG GCGCGACATG GGGGTGGTCG GCCTGGACGA CCTGCCGCTG
GCCGAGCTGA CCTATCCGCC GCTGACCAGC GTCGCCATGG ACCCGGCGGG GATCGGCGTT
GCCGCCGCGC GCCTGCTGGC CCGGCGGCTG GCCGATGCCG GGGCGCCGGT CGAGCGCTCG
ATCCTGGCGC CGCGCCTGGT GGTCCGGGAG AGCAGCGGCT CGGATGCGGG TTGA
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| Protein sequence | MQRKRVTLDE VARIAGVSRA TVSLVVRKSP LVADHTREKV EQVMADLDYV RDIGAARLRN
NSSRTVGVIV PNLVNSFFTE FLAGVERVMG EDDRVVLLAN SQDDPRRQEE ILQRFRGHGV
DGVILCPAAG TDPDLPARMR RWGLPVVQSL REIGRDATDY AGADYIEGVR LAVQHLVGLG
RRRIAFLSVS ARTSAREERL AGFARALAET GATDAGIVEA DLTWEGAAHS AAEVLALRSR
PEAVLCFNDV LAAGLMLGLR RAGLEPGRDM GVVGLDDLPL AELTYPPLTS VAMDPAGIGV
AAARLLARRL ADAGAPVERS ILAPRLVVRE SSGSDAG
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