| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_5073 |
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| Symbol | |
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| ID | 4583634 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008688 |
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| Strand | + |
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| Start bp | 585961 |
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| End bp | 587415 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639772376 |
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| Product | bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase |
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| Protein accession | YP_918829 |
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| Protein GI | 119387795 |
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| COG category | [I] Lipid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0824] Predicted thioesterase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.459353 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATCG CGGCAATCGG CGGCGGGGTC ATCGGCGGCG GCTGGATCGC CCGCTTCATC
CTCTCGGGGC ATGACGTGGC GGTCCACGAT CCCCACCCCG AGGCGCAGCG CATCGTCGGC
GAGGTGCTGG CGAACGCGAC CCGCGCCTGG GAAAAGCTGT TCCAGGCGCC GCTGCCCCGG
CCGGGGCGCA TCCTCTGGGC CGGATCGGTG GCCGAGGCGG TCGCGGGTGC CGATTATATC
CAGGAAAGCG TGCCCGAGCG GCTGGACCTG AAGCACCGCA TCATCGCCGA GATCGAGGCC
GCCGCGCCCG AGACGGCGCT GATCGGTTCC TCGACCTCGG GCTTCAAGCC GTCCGAATTG
CGGCAGGGGG CGCGGCATCC CGGCCGCATC CTCGTCGCCC ATCCGTTCAA CCCGGTCTAT
CTCTTGCCGG TGGTCGAGGT CGTGGGCGGC GGCGAAGCGG CCGGGCGCGC CTGCGAGATC
CTGACCGAAA TCGGCATGAA GCCGGTGCGG ATCGCACGCG AGATCGACGC CCATATCGGC
GACCGCCTGC TGGAAGCCGT CTGGCGCGAG GCGCTGTGGC TGGTGCATGA CGGCATCGCC
ACCACCGAAG AGATCGACGA CATCATCCGC TTCGGCTTCG GCCTGCGCTG GGCGCAGATG
GGCCTGTTCG AGACCTATCG CATCGCCGGC GGCGAGGCCG GGATGCGGCA TTTCCTGGGC
CAGTTCGGCC CGGCGCTGAA ATGGCCCTGG ACCAAGCTGA TGGATGTGCC CGACCTTGAC
GATGCGCTGA TCGACCGCAT CGCCGGCCAG TCCGACGCGC AGTCGGGCCA GCACTCGATC
CGCGAGCTGG AGCGGATCCG TGACGACAAC CTGGTCGGCA TCTTCCAGGC GCTCAAGGCG
AACGATTGGG GCGTCGGCCA GACCGTGCGC GCGCAGGAGG ACGGTTTCTA TGCCCGCCAG
CCCGCGCCGG CCAGCGGCTA CCCGCTGCGC ATCCATCAGG CCCGCGTCAC CGGCGGCTGG
GTCGATTACA ACGGCCACAT GACCGAATTC CGCTATCTCC AGGTGCTGGG GGATGCGACC
GACGCCTTCC TGATCCATAT CGGGCTGGAT GCCGATTACC GGGCGCAGGG CCGCTCGGCC
TATACGGTCG AGACCCATAT CCGCCATCTG GCCGAGGTGA AGGCGGGCGA ATTGCTGACG
GTCGAGACCC GGCTGCTGGG CCATGATGCC AAACGCTTCC GCCTGCATCA CGCCATCCTG
CGCCAGGACG GGACCGAGGT CGCGACCGGC GAGCATATGC TTTTGCATGT CGATACCGGC
GAGGGCCGCG CCATCCCGAT GCCGCCGGCG CTGCTGGAGG CGCTGGACCG GGTGGCGGCG
CAGGACCGCG CGCCGCATCC CGACCATGCC GGCGCCGGCA TCCGCCCGAT CCGCCAGAAG
GAGGCCACCG CATGA
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| Protein sequence | MKIAAIGGGV IGGGWIARFI LSGHDVAVHD PHPEAQRIVG EVLANATRAW EKLFQAPLPR
PGRILWAGSV AEAVAGADYI QESVPERLDL KHRIIAEIEA AAPETALIGS STSGFKPSEL
RQGARHPGRI LVAHPFNPVY LLPVVEVVGG GEAAGRACEI LTEIGMKPVR IAREIDAHIG
DRLLEAVWRE ALWLVHDGIA TTEEIDDIIR FGFGLRWAQM GLFETYRIAG GEAGMRHFLG
QFGPALKWPW TKLMDVPDLD DALIDRIAGQ SDAQSGQHSI RELERIRDDN LVGIFQALKA
NDWGVGQTVR AQEDGFYARQ PAPASGYPLR IHQARVTGGW VDYNGHMTEF RYLQVLGDAT
DAFLIHIGLD ADYRAQGRSA YTVETHIRHL AEVKAGELLT VETRLLGHDA KRFRLHHAIL
RQDGTEVATG EHMLLHVDTG EGRAIPMPPA LLEALDRVAA QDRAPHPDHA GAGIRPIRQK
EATA
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