Gene Pden_5071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_5071 
Symbol 
ID4583632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp583458 
End bp584345 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content67% 
IMG OID639772374 
Producthypothetical protein 
Protein accessionYP_918827 
Protein GI119387793 
COG category[S] Function unknown 
COG ID[COG3246] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.674247 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGTG ACGTCTTCAT CACCTGCGCG GTGACCGGAT CGGGACAAAG CCACAAGAAA 
TCCGACCTGG TGCCGGTCAC GCCCAAGCAG ATCGCCGAGG CCTGCATCGA GGCGGCGAAT
GCGGGCGCGG CCATCGCCCA TGTGCATGTG CGCGACCCCC AGACCGGCGC GCCTTCACGC
GATCCGGCGC TGTATCGCGA GGTGGTCGAG CGGGTGCGCT CGTCCGGCAC CGACGTGGTG
CTGAACCTGA CGGCGGGCAT GGGCGGCGAC ATCGTGCTGG GCTCGGCCGA GGCGCCGTTG
CCGCTGTCGC CGCAATCCGA CCTGATCGGC GCCAGCGAGC GGTTGGTCCA TGTCGAGGAA
TTGCTGCCCG AGATCTGCAC CCTTGATTGC GGGACGATGA ATTTCGCCGA GGCCGATTAC
GTCATGACCA ACACGCCCGG CACCCTGCGC GCCATGGCCG CGCGCATCCA GGCGGCGGGG
GTCAGGCCCG AGATCGAGGT CTTCGACACC GGCCATCTGT GGCTGGCCAA GACGCTGGTG
GACGAGGGGT TGATCGACGA CCCGGTGATG ATCCAGCTGT GCATGGGCAT CCCCTATGGC
GCGCCGGCCG ATCCGAACAG CCTGATGGCG ATGGTGAACA ACATCCCGCC GGGCTGGGTC
TATTCCATGT TCTCGATCGG GCGGATGCAG CTTCCCTATG TGGCGCAGGC GGCGCTGGCG
GGCGGCAATG TGCGCGTCGG GCTGGAGGAC AACATCTGGC TGGACAAGGG CGTGCTGGCC
CGCAACGGCG ATCTGGTCGA ACGGGCGGCG ACGATCCTGA ATGCCATGGG CTGCCGCATC
CTCGGCCCGC AGGAGGTGCG CGACAAGCTG AAGCTGACCC GGCGCTGA
 
Protein sequence
MNRDVFITCA VTGSGQSHKK SDLVPVTPKQ IAEACIEAAN AGAAIAHVHV RDPQTGAPSR 
DPALYREVVE RVRSSGTDVV LNLTAGMGGD IVLGSAEAPL PLSPQSDLIG ASERLVHVEE
LLPEICTLDC GTMNFAEADY VMTNTPGTLR AMAARIQAAG VRPEIEVFDT GHLWLAKTLV
DEGLIDDPVM IQLCMGIPYG APADPNSLMA MVNNIPPGWV YSMFSIGRMQ LPYVAQAALA
GGNVRVGLED NIWLDKGVLA RNGDLVERAA TILNAMGCRI LGPQEVRDKL KLTRR