| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_5064 |
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| Symbol | |
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| ID | 4583625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008688 |
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| Strand | - |
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| Start bp | 576413 |
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| End bp | 577693 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639772367 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_918820 |
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| Protein GI | 119387786 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.556964 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGATCTTT TCCTGCTTCT GACCACCTTT TTCGTGACCC TGGCGCTTGG CGTGCCGGTC
GCGGTCTGCC TTGGGCTTTC GTCGCTGGCC TATATCCTGT CGGCGGGGCT GCCGGTCGTC
ATCATCCCGC AGCGCATGTA TGCGGGCATG GACGTCTTTG TCCTGCTGTG CATCCCCGGC
TTCATCCTGG CCGGCAACCT GATGAATTTC GGCGGCATCA CCGAGCGTAT CATCCGCCTG
GCCAACGCCA TGGTGGGCTG GATGCGCGGC GGGCTGGCCA TGGCGAACGT CGCGGATTCG
ATGATGTTCG GCGGCGTCTC GGGCACGGCG GTCGCCGATG TCGCGGCGAC CGGCGGCGTG
ATGATCCCCG GCATGAAGAA ATCCGGCTAT CCCGGCGATT TCGCCGCCGC GATCACCGCC
GCCTCGGCCA CCGTGGGGCC GATGCTGCCG CCCAGCGTGC CGATGATCAT CGTGGGCGCG
CTGTCGGGGA TCTCGGTCGG CCAGCTGTTC CTGGCCGGTG CGGTGCCGGG CGTGCTGATG
GGCATCGGCA TGGCGATCAC CTGCTATATC CTGGCCGTGC GCCGCAACTA TCCGCGCCAG
CAATGGCAGG GCTTCGGCGA GCTGATCGCG GCCTTCCTCG CCGCCTTCTG GGCGCTGGCC
ATGACCGGGC TGATCATCGG CGGCCTGCTG ACCGGCATCG CCACCCCGAC CGAGACCGCC
ATCGTCGCCT GCCTTTACGC CTTTGTCGTC GGCGCCTTCG TCTATCGCGA GCTGCCGATC
CGCGCGGTGC CGCGCATCGT CGTCAACAGC GCGATCTCCT CGGCCGGCAT CCTGGCGCTG
GTCGGTTTCG CCAACGTCTT CGGCTCGATC CTGGCATCCG AGCGCATCCC GCAGATGCTG
GTCAGCACCG TGCTGGCGAT CACCGACAAC CCGATCCTGG TGATCCTGCT GATCAACGTG
CTGCTGTTGT GCGTCGGCAT GTTCATGGAA ACCATCGCCG CGCTGATCAT CCTGTTCGTG
CCGCTGCTGG GGCTGGCGAC CAGCGTCGGC ATCGAGCCGC TGCATTTCGC CACCTTCGCG
GTCCTGAACC TGATGATCGG CCTGACCACG CCGCCGGTCG GGGTCTGCCT GTTCGTCGCC
TGCAACATCG CACGCGAACC GCTGGCCAAG GTGATCAGCG CGGTCATCCC CTTCCTGATC
TCGAACATCG TCGTGCTGCT GCTGGTATCC TACTACCCGC CCTTTGCCAC CTGGCTGCCG
ACGACGCTGA TGGGGAACTG A
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| Protein sequence | MDLFLLLTTF FVTLALGVPV AVCLGLSSLA YILSAGLPVV IIPQRMYAGM DVFVLLCIPG
FILAGNLMNF GGITERIIRL ANAMVGWMRG GLAMANVADS MMFGGVSGTA VADVAATGGV
MIPGMKKSGY PGDFAAAITA ASATVGPMLP PSVPMIIVGA LSGISVGQLF LAGAVPGVLM
GIGMAITCYI LAVRRNYPRQ QWQGFGELIA AFLAAFWALA MTGLIIGGLL TGIATPTETA
IVACLYAFVV GAFVYRELPI RAVPRIVVNS AISSAGILAL VGFANVFGSI LASERIPQML
VSTVLAITDN PILVILLINV LLLCVGMFME TIAALIILFV PLLGLATSVG IEPLHFATFA
VLNLMIGLTT PPVGVCLFVA CNIAREPLAK VISAVIPFLI SNIVVLLLVS YYPPFATWLP
TTLMGN
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