Gene Pden_5056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_5056 
Symbol 
ID4583617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp568023 
End bp568931 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content70% 
IMG OID639772359 
ProductABC transporter related 
Protein accessionYP_918812 
Protein GI119387778 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.844299 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGGG CGACGGCCAT CGACGTGTCC GGGCTGACGA AATCCTTCGG CGGCAGGACG 
GTCGTCGATG ACGTCGCGCT GCGGGTGGCC GGGGGCGAGA TCGCCGGGTT CCTTGGCCCG
AACGGATCGG GCAAGACCAC CTGCATCCGC ATGATCTGCG GCTTGCTGAC GCCCGATGCG
GGCAGCGGCA CCGTGCTGGG CCTCGACGTG CGCCGCCAGC AGCGCCAGAT CCGGCGGCAG
GTCGGCTACA TGACGCAGAA ATTCTCGTTC TACGAGGATC TGTCCATCGA GGAGAACCTG
GCCTTCGTCG CCGGACTCTA TGGCCTGCCG CGGCAGGCCG TGCGCGATAC GCTGGAGGAT
CTGGGCCTGA CCTCGCGCAA GACCCAGCTT GCCGGCAGCC TGTCGGGCGG CTGGAAGCAG
CGGCTGGCGC TGGCGGCCTG CATCATGCAC CAGCCGCGCC TTCTGCTGCT GGACGAGCCG
ACGGCCGGCG TAGATCCCAT GGCCCGGCGC CAGTTCTGGG ACGAGATCCA CGCCCGCGCA
TTGGGCGGCA TGACCGTTCT GGTCTCGACC CATTACATGG ACGAGGCCGA GCGCTGCCAC
CGCATCAACT ACATCGCCTA TGGCCGGCTG GTCGTCTCGG GCACCGTGGC CGAGGTGATC
GCGGGCGCGC GGCTCGTCAC GCTGACCGTG CAGTCGGCGC GGCCGGGCGA GCTGGCCGAG
CGCCTGCGCA AGGCGCCGGG CGTCGGGCAG GTCGAGCCCT TCGGCACTGC GCTGCATGTG
ACCGGGACCG ACCGCACCCG GCTGGAGGCC GCGCTGGAGG CCGAGGGCGT GACCGGCCAC
CCGGTCGAGA CCAGCCTGGA GGACGTGTTC ATCCGGTTGA TGGAGCTTTC CGAGGACAAC
ATGCGATGA
 
Protein sequence
MTGATAIDVS GLTKSFGGRT VVDDVALRVA GGEIAGFLGP NGSGKTTCIR MICGLLTPDA 
GSGTVLGLDV RRQQRQIRRQ VGYMTQKFSF YEDLSIEENL AFVAGLYGLP RQAVRDTLED
LGLTSRKTQL AGSLSGGWKQ RLALAACIMH QPRLLLLDEP TAGVDPMARR QFWDEIHARA
LGGMTVLVST HYMDEAERCH RINYIAYGRL VVSGTVAEVI AGARLVTLTV QSARPGELAE
RLRKAPGVGQ VEPFGTALHV TGTDRTRLEA ALEAEGVTGH PVETSLEDVF IRLMELSEDN
MR