Gene Pden_5046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_5046 
Symbol 
ID4583607 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp558688 
End bp559206 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content65% 
IMG OID639772349 
ProductMarR family transcriptional regulator 
Protein accessionYP_918802 
Protein GI119387768 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGACGAGG AACCGATAAG ATACTGGGAA AACGACCGGA TCGGACGCGG CATGCGGCAA 
TGGCGGCGCG AGGTGCCGCA GATCGACAGC AGCGGCAAGG CAGTCGTCGG CCGCGTCCTG
CATCTGCAAG AGGTCATCAT CGACAAGGTG AACCGCAACC TTGCACGATT CGGGCTGAAG
TTCCCGACCT ATGCCATCCT GGCCACGATC CGCGTCAGCG GCCCGCCCTA TCGCATGACG
CCCAGCGAGT TGCTGTCCGC CATCGTCATC TCCTCGGGCG GGCTGTCCAA CCTGCTGCGC
AAGCTGGAAA GGGACGGGCT GGTGCAGCGC AGCGCCGACA AGCGCGACGG CCGCGGCGTC
ATCGTCGAGC TGACCGAAAA GGGCATCGCC CTGACCGATG AGAGCATGGC CGCCCATGCG
GCGCTGGAGC GCGAACTGAT CGCGGCGCTG TCGCCGCAGG ATTGCGAAAG CATGGCGCGG
ATGCTGAGCG TGCTGATCGC CACCAACAGC GCGGGATAG
 
Protein sequence
MDEEPIRYWE NDRIGRGMRQ WRREVPQIDS SGKAVVGRVL HLQEVIIDKV NRNLARFGLK 
FPTYAILATI RVSGPPYRMT PSELLSAIVI SSGGLSNLLR KLERDGLVQR SADKRDGRGV
IVELTEKGIA LTDESMAAHA ALERELIAAL SPQDCESMAR MLSVLIATNS AG