| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_5038 |
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| Symbol | |
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| ID | 4583599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008688 |
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| Strand | - |
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| Start bp | 550003 |
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| End bp | 551244 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639772341 |
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| Product | capsule polysaccharide export protein-like |
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| Protein accession | YP_918794 |
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| Protein GI | 119387760 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3524] Capsule polysaccharide export protein |
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| TIGRFAM ID | [TIGR01010] polysaccharide export inner-membrane protein, BexC/CtrB/KpsE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCAAC CCGCCGCGAA GCCGGCCCCG AAACCTGCCG CGAAGCCCGC CGCAAAGCCT
CTGGCCCGGG TCCGGCCCCA GCAGCCGGCC GCCGCCCCCG ACCAGCCGGT GCGCCCGACC
GTCGGCATCG CCGAGCCGCG CCGCCGGCAC TGGCTGATCC TGGGCTCGTT CCTGGCGCTG
GTGCTGCTGC CCAGCCTGCT CTGGGCCGCC TATCTCTGGC TGCGCGCCGA GGACCAGTAT
GTCTCGACCG TCGGCTTCTC GGTGCGCAAG GAACAGTCCA CCCCCTCGAT CGACCTGCTG
GGCGGGCTGG CGCCGCTGGC CGGCGGCGCC AGCGCCTCGG ACACCGACAT CCTCTACGAA
TACATCCGCA GCCAGGACAT GGTCGAAAGG ATCGACGCCC GGCTCGACCT GCGCGCGCGC
TTCTCGGGGC CTTGGCCGCA TGACTTCGTC TTCGCCTTCG ACCCCGAGGG CCATGTCGAG
GACCTGACCG ACTACTGGCA GCGCCAGGTC AAGGTGCTCT ACGACAGCAC CACCCAGCTG
ATCACGCTGA AGATCAGCGC CTTCACCGCC CGGGACGCGC AGGAGATCGC CGCGGCGGTG
TTCCAGGAAA GCTCGGACAA GATCAACCAG CTCTCGACCA TCGCCCAGGA CGACGCCACC
CGGCTGGCCA AGGCCGAGCT GGACAAGGCC CGCGCCGAGC TGACCGAGAC CCGCCAGGCG
ATGACCGCCT TCCGCATGCG CTCGCAGATC GTCGATCCCG AGGCGGACCT GGCCGGGCAG
ATGGGGGTGC TGAGCGGGCT GCAGGCGCAG CTGGCCGAGG TGCTGGTCGC CCACGACCTG
CTTCTGGACA ACGCCCAGCC CACCGACCAC CGCGTCACCC AGTCGCAGCA GAAGATCGAC
GCCCTGCGCC GGCTGATCGA CGCCGAGCGC GCCAAGTTCG GCGCCGAGGG CAAGGGACCG
GCGGGCGAGA GCTATGCCCA GCTGATGGCC GAATACGAAA AGCTGGCCGT GGACCGCGAA
TTCGCCGAGG GCGCCTATCG CTCGGCCCGC ATCGCCCATG AGACGGCGCT GGCCGAGGCA
CAGCGCCAGG CGCGCTACCT GGCCGCCCAT ATCGAGCCCA AGGTGGCGCA AAGCGCGACC
GAGCCGAACC GGCCCTGGCT CTGGGCGATG ATCACCGGCA TGCTGCTGGC GGGCTGGTCG
ATCCTGGTGC TGATCTATTA CAGCGTCCGC GACCGCCGCT AG
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| Protein sequence | MAQPAAKPAP KPAAKPAAKP LARVRPQQPA AAPDQPVRPT VGIAEPRRRH WLILGSFLAL
VLLPSLLWAA YLWLRAEDQY VSTVGFSVRK EQSTPSIDLL GGLAPLAGGA SASDTDILYE
YIRSQDMVER IDARLDLRAR FSGPWPHDFV FAFDPEGHVE DLTDYWQRQV KVLYDSTTQL
ITLKISAFTA RDAQEIAAAV FQESSDKINQ LSTIAQDDAT RLAKAELDKA RAELTETRQA
MTAFRMRSQI VDPEADLAGQ MGVLSGLQAQ LAEVLVAHDL LLDNAQPTDH RVTQSQQKID
ALRRLIDAER AKFGAEGKGP AGESYAQLMA EYEKLAVDRE FAEGAYRSAR IAHETALAEA
QRQARYLAAH IEPKVAQSAT EPNRPWLWAM ITGMLLAGWS ILVLIYYSVR DRR
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