| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_5035 |
|---|
| Symbol | |
|---|
| ID | 4583596 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008688 |
|---|
| Strand | + |
|---|
| Start bp | 546983 |
|---|
| End bp | 548182 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639772338 |
|---|
| Product | cobyrinic acid a,c-diamide synthase |
|---|
| Protein accession | YP_918791 |
|---|
| Protein GI | 119387757 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG1192] ATPases involved in chromosome partitioning |
|---|
| TIGRFAM ID | [TIGR03453] plasmid partitioning protein RepA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTCAG CTGTCCCCCC CGTCACCCTG GAAGAGCTTG CCGTGCTGAG CCAGCGCGCC
TCGACCGTGA TCGAACGCCT GCGCGAGCGT GTCTTTGCGC CCGGAACCCA AAAGCAACTT
GAATTGCTGT TCAACGTCCG CACTGCGGCG GAAATGGTCG GTCGGTCCGA AAAGGCCATC
CGAGATGCCG AAACCGACGG CAGGCTGCCT GAACCTGTCA AGGATGCCGC CACGAACCGC
CGGCATGGCT ACACGCTGGC CGAGGTGAAC CGGATGCGCG AGGTTTTCGG CACTCTGCCG
CATCGCGCGC CCGAAGACCC GCCGCTGGTC ATGGCCGTGC AGAACTTCAA GGGCGGGGTA
GGGAAGTCCA CCCTTGTCGT GCATCTGGCG CAGCATTTCG CGCTCAAGGG TTACCGGGTT
TGCGTGATCG ATTGCGATTC GCAAGCTTCG ACCACCGCGG TTTTCGGTCT CAACCCCGAT
GTGGATGTCG ATGAGGAAGA GGATACGCTT TACCCCTTCC TGCAGCATGG CGGCCCCAAG
ACGCTGCATT ATGCGCTGCG GGCGACCTAT TGGCCGGGCA TTGCGCTGAT TCCCGCCAAT
CTGGGGCTTT ATGACGCGGA ATACGAATTC GCCGCCCGCA TGGCGCGCGA CCCGACCTTC
ATCCTGGACC GGCTGCGCGA GGGCGTGGCC TCGATCGCCG ATCAGTTCGA CATCATCCTG
CTGGACCCGC CGCCGGCCCT GGGGATGCTG TCGCTCTCGG TGCTGCGCGC GGCCAATGCG
CTGCTGATCC CAGCGCCGCC GAACAATATC GACTTCGCCT CGACCGCGCA TTTCCTCAAG
ATGATGGAAT CCACGCTGGC TGAACTGGCC CGCCATGGCG GTGCGCGCGA ATACAGTTTC
GTCAAGATCC TGACCTCCAA GATGAACGAC CAGAAATCGG CGCATCAGGC GATCAAGCGC
ATGATGGACG CGGTCTTTCC GCAGGATATG CTGAGCGCAT CGCTGAAGGA TTCGGCCGAG
ATCGACAACG CCACCGCCAA TCTGATGACC GTCTATGAAC TGACCGGGCC CGCGACGCGG
ACCGAAACCC ACAAGCGTTG CCGCGCCTAT CTGGATGCGG TCGGGCGCGA GGTCGAGCTG
CTGATCCGCA AGACCTGGCC CAGCCATCAC CGCCAACTGC GCAAGGAGGG CCTGCTGTGA
|
|---|
| Protein sequence | MNSAVPPVTL EELAVLSQRA STVIERLRER VFAPGTQKQL ELLFNVRTAA EMVGRSEKAI
RDAETDGRLP EPVKDAATNR RHGYTLAEVN RMREVFGTLP HRAPEDPPLV MAVQNFKGGV
GKSTLVVHLA QHFALKGYRV CVIDCDSQAS TTAVFGLNPD VDVDEEEDTL YPFLQHGGPK
TLHYALRATY WPGIALIPAN LGLYDAEYEF AARMARDPTF ILDRLREGVA SIADQFDIIL
LDPPPALGML SLSVLRAANA LLIPAPPNNI DFASTAHFLK MMESTLAELA RHGGAREYSF
VKILTSKMND QKSAHQAIKR MMDAVFPQDM LSASLKDSAE IDNATANLMT VYELTGPATR
TETHKRCRAY LDAVGREVEL LIRKTWPSHH RQLRKEGLL
|
|---|
| |