Gene Pden_5028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_5028 
Symbol 
ID4583589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp539210 
End bp540220 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content60% 
IMG OID639772331 
Producthypothetical protein 
Protein accessionYP_918784 
Protein GI119387750 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGAAGCC GGAAGGGGGT TGCTAAGGGG ATAAGTTCTT GGCGGATCAG CGCTCCGCCC 
TGTCACAGCG GAAAGCCCAT GAACCTGACT GTCCATATCG GCACGACCAA GACCGGATCG
TCGAGCATTC AGAAATTCCT AAGCAATAAC CGCGACATAC TGCGCGACAG GGGAATCCTG
GTGCCGTCCA GTCTGGGGCG CGTCATCCAT CTCAATGCGG TCCTGTCCGC ATTGCCCTTT
GGCAAAAGCC CGGATCTGGC TCAGACCATT CCCTTGACTG ACGCCGAGCA GCATGCCGCC
TTCCGCGAAA ACACAAGCGC CGCCTTCAGG GAAGAGATCG CCGGGGCTCC GGGTTGCCAG
GAAGTCGTGA TCACCGCCGA ACAGCTGCAC TCGCGCTTGC CTCTGCCGGA CTATATCCAG
ACGTTCCGTG ACCTGTTCTG CCGCGATTTC AGCACGATCC GCATCGTGAT CTACGTCCGG
CCGCAGCTCG ACCAGATCAT CTCGCTTTAT TCGACCATGC TGCGAGGTGG ATACGCACAT
TCGCTGGGTG ATTTCATCAA GAGCCGGATG CAGCCGATCT TCCGGCCTTA TTTCGACCTG
CGTGATGTCA TTACCCGCTG GGCCGATGTC TTCGGCCGCG AAAACGTCAT CGTCCGCCCC
TACAAGGGCG TTGCCCGGGA TTTCGGCACT CTGGGCGATT TCTGTGAACT GCTGAAGCTC
GACCTGGGTG AAGAAGGCTG GCAGCTCGAC AAACAGCAAG TCAACGCCTC GATCAATGTC
GCTGGGCAAG AATTGCTGTT GATGCTCAAC AAGACCGGCG CGCTGGACGC TGTCCAACGA
CGCAAGGTAG CGAAATGGGC TGAAGCCCAT TGCACAGGCC GGGGCGCCAT GCCGCCGCTG
GCCCAGGCTC AGGCCTTTCA GTCCCAGTTC GATGAAGGCA ATGCCTGGGT GACCGAGACC
TTCTTCCCCG ATCACCCGGA ATATCTGGAA CCGCGCTGGC CCGAGGCCTG A
 
Protein sequence
MRSRKGVAKG ISSWRISAPP CHSGKPMNLT VHIGTTKTGS SSIQKFLSNN RDILRDRGIL 
VPSSLGRVIH LNAVLSALPF GKSPDLAQTI PLTDAEQHAA FRENTSAAFR EEIAGAPGCQ
EVVITAEQLH SRLPLPDYIQ TFRDLFCRDF STIRIVIYVR PQLDQIISLY STMLRGGYAH
SLGDFIKSRM QPIFRPYFDL RDVITRWADV FGRENVIVRP YKGVARDFGT LGDFCELLKL
DLGEEGWQLD KQQVNASINV AGQELLLMLN KTGALDAVQR RKVAKWAEAH CTGRGAMPPL
AQAQAFQSQF DEGNAWVTET FFPDHPEYLE PRWPEA