Gene Pden_5025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_5025 
Symbol 
ID4583586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand+ 
Start bp535604 
End bp536038 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content59% 
IMG OID639772328 
Productglycerol-3-phosphate cytidylyltransferase 
Protein accessionYP_918781 
Protein GI119387747 
COG category[I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0615] Cytidylyltransferase 
TIGRFAM ID[TIGR00125] cytidyltransferase-related domain
[TIGR01518] glycerol-3-phosphate cytidylyltransferase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.310334 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCGTG TTCTGACCTA TGGCACTTTC GACACCCTGC ATTATGGACA CATCCGTCTG 
CTGCAACGCG CCCGTGCGCT TGGGGATTAC CTGATCGTCG GCCTTTCGAC CGACGAGTTC 
AATGCCAGCA AGAACAAGCA GGCCTTCCAT AGCTGGGAAG AGCGCAAGGC GCATCTCGAG 
GCGCTGCGCT ATGTCGATCT GGTCATCCCG GAACGGACCT GGGAACAGAA ACCCCACGAC 
GTGAAGCTTT ATCACGTCGA TATCTTTACC ATGGGCAGCG ACTGGCAGGG CAAGTTCGAC 
GATCTTTCCG CGCTTTGCGA GGTGATCTAT CTCGAACGCA CCAACGGGAT TTCCAGCACC 
ATGATCCGCA GCAGCCTGCA ACCGGACGAA CCGTCGAGCA CGAGCCCGGC GGCCATACTG 
AAGCGGGCGC GCTGA
 
Protein sequence
MRRVLTYGTF DTLHYGHIRL LQRARALGDY LIVGLSTDEF NASKNKQAFH SWEERKAHLE 
ALRYVDLVIP ERTWEQKPHD VKLYHVDIFT MGSDWQGKFD DLSALCEVIY LERTNGISST 
MIRSSLQPDE PSSTSPAAIL KRAR