| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_5023 |
|---|
| Symbol | |
|---|
| ID | 4583584 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008688 |
|---|
| Strand | - |
|---|
| Start bp | 534012 |
|---|
| End bp | 534962 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639772326 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_918779 |
|---|
| Protein GI | 119387745 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACATA GGACACTTGT CACCGGAGGT GCGGGCTTCA TCGGCAGCCA TCTCGTCGAA
CACCTGGCGG CGGCCGGCGA ACGGGTCGTC GTGCTGGATA ACCTGTCCAG CGGCAAGCCC
GAGAATCTTC CGCCGCAGGT CGAGCTGATC GCCGGCGACA TCACCGATGG CGCGCTGGTG
GGCGAACTGG TGCAAGGGGT CGACTGCGTC TTTCATCTGG CGGCGCTGGT CTCGGTTCAG
GAATGTATCA AGGACTGGGA GCTTGGCCAT CGGATCAACC TGGATGCGAC GGTGGGGCTG
TTCCACGCCG CCGCCAGGGC CCGGCCGGGC GGAGTCCCGG TGGTCTATGC CTCGTCGGCG
GCCGTCTACG GCGACAGGTC GGGGTCGACA TGCTGCGAAA CCAGCCTGCC CGCACCGATC
TCGCCCTATG GCGTCGACAA GCTGGGCTGC GAGCATCAGG CCCGCGCGAT GGCCGAGATT
CACAAGCTGC GATCGGTCGG CCTGCGCTTC TTCAACGTCT ATGGCCCCCG CCAGGACCCG
GCCTCGCCCT ATGCCGGGGT CATTTCCAAA TTCTGCGCGA ACCGCCTGGC CGACAGCCCC
CATACCGTGT TCGGCGACGG CCTGCAAAGC CGCGACTTCA TCTATGTCGC CGACATTGTC
GAGGGGCTGG TCCGCGCCCG CGCCTATGCG CAGGGCCAGG AGGGGGCTGC CGTGTTCAAC
CTGTGCACGG GGGCCGAGAC CACGCTTGTC GGCCTTGCTT CCGAAATCGA CGGCATTGCC
GACCGGGGTC CGACCCCGAT CATCCATGCC GATCCGCGTT CGGGGGATAT CCGTATGTCG
CTGGGCGATC CGTCGCTGGC GGCGCGCGAC CTGGGCTTTA CCGCCCGGAC CGACATCCGC
AGCGGATTGA GCCGACTGTG GGCGTCGCTG ACGGAAAGCC AAGCCACCTG A
|
|---|
| Protein sequence | MTHRTLVTGG AGFIGSHLVE HLAAAGERVV VLDNLSSGKP ENLPPQVELI AGDITDGALV
GELVQGVDCV FHLAALVSVQ ECIKDWELGH RINLDATVGL FHAAARARPG GVPVVYASSA
AVYGDRSGST CCETSLPAPI SPYGVDKLGC EHQARAMAEI HKLRSVGLRF FNVYGPRQDP
ASPYAGVISK FCANRLADSP HTVFGDGLQS RDFIYVADIV EGLVRARAYA QGQEGAAVFN
LCTGAETTLV GLASEIDGIA DRGPTPIIHA DPRSGDIRMS LGDPSLAARD LGFTARTDIR
SGLSRLWASL TESQAT
|
|---|
| |