| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_5019 |
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| Symbol | |
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| ID | 4583580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008688 |
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| Strand | - |
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| Start bp | 530421 |
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| End bp | 531179 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639772322 |
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| Product | beta-ketoadipate pathway transcription regulator |
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| Protein accession | YP_918775 |
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| Protein GI | 119387741 |
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| COG category | [K] Transcription |
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| COG ID | [COG1414] Transcriptional regulator |
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| TIGRFAM ID | [TIGR02431] beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.563485 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGAACA AGACCGACTT CATCGCCTCG CTTGCCAAGG GGCTTGGCGT GATCGAGGCG
TTCCGGGCCG AACGCCCGCG GCTCTCCATC GCCGAGGTGG CCGAGGCGAC GGGGCTGGAC
CGGGCGACGG CGCGGCGCTG CCTGCTGACC CTGCACGAGC TGGGCTATGC CGATTACGAC
GGCAAGTTCT TCACCCTGAC CCCGCGCATC CTGCGGCTGG GCATGGGGGC CTTGGCTGCG
ATGCCGCTGG CGCAACTGGT GCAGCCCTGG CTGGACCAGC TGTCCGAGCA GATCGGGCAA
TCGACCTCGG TCTCGATTCT CGACGGCACC GAGATCGTCT ATCTGGCGCG CGCGGCGCAG
CGGCGGGTGA TGTCCATCGG TCTGATGCCG GGCTCGCGGC TGCCGGCGCA TTGCACTTCG
ATGGGCCGGG TGCTGCTGGC GGCCCTGCCC GGACCCGAGG CGCGCGCCAT CATCGAGCGG
TCGGTCCTGA CGCCCCGCAC CCGCCACAGC CTGACCTCGC CCGAGGAGAT CATGGCGCGG
GTCGCCCGTG CCCGCGCGGA CGGCCATGCG GTGATCGACC AGGAGGTCGA GCTGGGCCTG
CGTTCGCTTG GCGTGCCGCT TTACAACGCC CACGGCCGGG TGGTGGCGGC GCTGAACATC
GGGGTGGCGG CGGTGCATTC CTCGGCCGAG GAGCTGGTCG CGCTTTACCT GCCGGCGCTC
TTGAAGGTGC AGGAGGGGCT GCGACGGGTG CTGCGATAG
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| Protein sequence | MVNKTDFIAS LAKGLGVIEA FRAERPRLSI AEVAEATGLD RATARRCLLT LHELGYADYD
GKFFTLTPRI LRLGMGALAA MPLAQLVQPW LDQLSEQIGQ STSVSILDGT EIVYLARAAQ
RRVMSIGLMP GSRLPAHCTS MGRVLLAALP GPEARAIIER SVLTPRTRHS LTSPEEIMAR
VARARADGHA VIDQEVELGL RSLGVPLYNA HGRVVAALNI GVAAVHSSAE ELVALYLPAL
LKVQEGLRRV LR
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