Gene Pden_5010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_5010 
Symbol 
ID4583571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp521021 
End bp521812 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content68% 
IMG OID639772313 
ProductABC transporter related 
Protein accessionYP_918766 
Protein GI119387732 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTAGCAC AGGCCCTCAA GATCATCCCG CAGCAGGCGG GCAGCGCGAT CAACATCGAG 
GCGGTTTCGC ACCGCTTCGA TCTGGAGGGT GCGCCGCTGC CGGTGCTGGA CGACATCGGC
TTCGATATCG AGCCGGGTTC CTTCGTCGCG CTGCTGGGTC CTTCGGGCTG CGGCAAGTCC
ACGCTCTTGC GGCTGATCGC GGGGCTGGAC CATCCGGCGC AGGGCCATAT CCGCGTCGCG
GGCGCCGAAG TGGCCGATCC CGACCCCTCG CGCATCCTGG TCTTTCAGGA TCCGACGCTG
TTTCCCTGGC GGACGGTGCG GGCCAATGTC GCGCTTGGGC TCGAGGCGCA GGGCACGCTG
AAGTCCGAGG GCCACCGCGT GGACGAGGCC ATCCGGCTGG TCGGCCTGTC GGGTTTCGAC
AAGGCCTATC CGCACCAGCT TTCGGGCGGC ATGGCGCAGC GCGTCGCCCT GGCCCGGGCG
CTGGTCAACC GGCCCAATGT CCTGTTGCTG GACGAACCGC TGGGCAAGCT CGACAGCCTG
ACGCGGCTCG CGATGCAGAC CGAACTGACG CGGCTGTGGC AGCAAAGCGG GCTGACCGCG
GTGCTGGTGA CGCATGACGT GGAAGAGGCG CTTTACCTGG CGCAGCGCGT CATCGTCTTT
GGCCCGCGCC CGGCGCGTAT CGTGGCCGAT CTGGCCGTCG ATCTGCCCTA TCCGCGCCAT
CGCGGCGATC CCAGGCTGGC CGAGTTGCGG CATGAGGCGC TGGGCCATCT GGGTCTGGAT
TCGAGCTGGT AG
 
Protein sequence
MVAQALKIIP QQAGSAINIE AVSHRFDLEG APLPVLDDIG FDIEPGSFVA LLGPSGCGKS 
TLLRLIAGLD HPAQGHIRVA GAEVADPDPS RILVFQDPTL FPWRTVRANV ALGLEAQGTL
KSEGHRVDEA IRLVGLSGFD KAYPHQLSGG MAQRVALARA LVNRPNVLLL DEPLGKLDSL
TRLAMQTELT RLWQQSGLTA VLVTHDVEEA LYLAQRVIVF GPRPARIVAD LAVDLPYPRH
RGDPRLAELR HEALGHLGLD SSW