| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_5008 |
|---|
| Symbol | |
|---|
| ID | 4583569 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008688 |
|---|
| Strand | - |
|---|
| Start bp | 519031 |
|---|
| End bp | 520572 |
|---|
| Gene Length | 1542 bp |
|---|
| Protein Length | 513 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 639772311 |
|---|
| Product | copper resistance protein CopC |
|---|
| Protein accession | YP_918764 |
|---|
| Protein GI | 119387730 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1276] Putative copper export protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGGCG GCAGAGCCTT TCGGTTCGTT CTGGCCGGGC TGGCTGCGCT GATCTGGTCC
GCCGGGCTGG CGCTTGGCCA TGCCAGCCTG ATTGCCGCCG ACCCGCCCGA TGGCGCGGTG
CTGCAGACCG CCCCGCCCGT GCTGTCGCTG ACCTTCAGCG AACCGGCCCG CCCATTGGTC
GCGCGGCTGA CTGCCGCCAC GGGCGAGAGT CGGCTGCTGG ACCCGCCGCA GGTGCAGGGC
AACCGCCTGA TCTATGCCAT GCCCCCCGAT CTGGACCGGG GCAGCCATCT GCTGTCATGG
CGCGTGACGT CGGGCGACGG GCATCCGGTC GCCGGGGCCA GCCTGTTTTC GCTGGGCGAG
TCCACCGGCG CGATCCAGGC CGCGCCCGGG GCGCCGCCGG CCACGCGCGC CGGGCTGTGG
CTGCTGCGTG CCGTGCTGGT CGCGGCATTG CTGATCGGTG TCGGCGGCGC GGTGTTCCGG
GCCTTTCTGT CGGACGAGCC CCGGCGCGGA TCGCCTGTCG CGGCGGGGGC GGGGCTTCTG
GCCCTGCCGC TGGTCTGGGG TTTTCAGGGC CTGGATCTGC TGGCGCTGTC CCCCGCCGGC
CTGTTGACTT CGGCGCCCTG GCGCGAGGGT GCCGCAGGCG CGCCGGGGCT GGCGCTGGCC
TTCGCCGCCG CCGCGCTGCT GGCCGCTTGT CTGCCGGGCC GCATCGCCGC CCTGCTGGCG
CTGCTGCTGG CCGGGGCGGC CGCCGCGAGT TCGGGCCATG CGGCGACGGC GGCGCCCGGC
CTGCTGATGC GGCCGGCGGT TGCCGCGCAT GTGGTGGCGG CGGCGCTGTG GATCGGCGCG
CTGGTGCCGC TGCTGGCCGA TCCGGCGCGC GGTCGCCGCG GGGCATTGCG GCGGTTCTCT
CGGCTGATCC CCTGGGTGCT GGGGGTCGTC CTGGCCTCGG GCACCGCCAT CGCCCTTGTG
CAGCTGGGCC GTCCCGCCGC GCTTTGGAGC ACCGATTACG GCCGCGTGCT GCTGGTCAAG
CTGGGGCTGG TGGCGCTGAT GCTGGCGGTG GCGCTGGCGA ACCGGCTGCT GCTGGCCCCG
CGCGCCATGC GGGGCGACGG CGGTCCGCTG CGGCTCGCCA TCGAGGTCGA GCTGGCGCTG
GTCGTGCTGA TCATCGCCAC GGTGGCGCTG TGGCGCTATA CGCCGCCGCC ACGCAGCCTG
CCGTCCGTCC TGCCCGAGAT CCGGTTGCAA CTCGCCTCGC CCGCGCTGTC GGCCGAGATC
GGCGTGTCGC CGCCCCGGGT CGGGCTGGTC TCGGTCACGG TTTCGGACCT GCGGGTCGAT
GGCCAGCCGG TCACGCCCAA ATCGGTCGAG GTCGAACTGT CGAAGCCCGC CTATGGGCTG
GGGCCGTTCC GCCACGAAGC CGCCCCCGAT TGCGGCGTGG TGGATGCCGG GCGCTTTCTC
TTGCCCCTCG ACGGCTACTG GGTGCTGACG CTGCGCGTCC TGGTCAGCGA TTTCCGGGTC
GAGGAACTGC GCGACCTGAT CGAGATCGCG CCGGCCTCCT GA
|
|---|
| Protein sequence | MIGGRAFRFV LAGLAALIWS AGLALGHASL IAADPPDGAV LQTAPPVLSL TFSEPARPLV
ARLTAATGES RLLDPPQVQG NRLIYAMPPD LDRGSHLLSW RVTSGDGHPV AGASLFSLGE
STGAIQAAPG APPATRAGLW LLRAVLVAAL LIGVGGAVFR AFLSDEPRRG SPVAAGAGLL
ALPLVWGFQG LDLLALSPAG LLTSAPWREG AAGAPGLALA FAAAALLAAC LPGRIAALLA
LLLAGAAAAS SGHAATAAPG LLMRPAVAAH VVAAALWIGA LVPLLADPAR GRRGALRRFS
RLIPWVLGVV LASGTAIALV QLGRPAALWS TDYGRVLLVK LGLVALMLAV ALANRLLLAP
RAMRGDGGPL RLAIEVELAL VVLIIATVAL WRYTPPPRSL PSVLPEIRLQ LASPALSAEI
GVSPPRVGLV SVTVSDLRVD GQPVTPKSVE VELSKPAYGL GPFRHEAAPD CGVVDAGRFL
LPLDGYWVLT LRVLVSDFRV EELRDLIEIA PAS
|
|---|
| |