Gene Pden_5007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_5007 
Symbol 
ID4583568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp517529 
End bp518857 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content67% 
IMG OID639772310 
ProductNtaA/SnaA/SoxA family monooxygenase 
Protein accessionYP_918763 
Protein GI119387729 
COG category[C] Energy production and conversion 
COG ID[COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.643407 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGCGC GACGGCTGAA ACTGGGCTTC ATGATGCATG GCAACGGCAC GGGCTGGGGC 
GACTGGCGCC ATCCGGCCGC GCATCCCGGC GCCTCGACCG ATTTCGGCTA TTACCGGCGC
CAGGCGCAGG TCGCCGAGGC GGCGAAGTTC GATTTCCTGT TCGTCGCCGA CAGCGTGCAT
ATCACGCCCA AGTCCAGCCC CCATTACCTC AACCGCTTCG AGCCCCTGAC CATCCTGTCG
GCGCTGGCGG CGGTGACGGA TCGGATCGGC CTGGTCGGAA CCCTGACCGT AAGCTATGCC
GAGCCCTACA ACGTGGCGCG GCAGTTCGCC TCGCTCGACC ATATCTCGGG CGGGCGCGCG
GGCTGGAACG TGGTGACGAG CTGGCTGGAG GGCTCGGCCC GCAATTTCAG CCGCGACAAG
CATTACGATC ACGCCACGCG CTATCGCCTT GCCGCCGAGC ATCTGGACGT GGTGCAGGGC
CTGTGGGATT CGTGGGAGGA CGATGCGCTG GTCCACGACA AGGCGTCGGG CCGGTTCTTC
GACCCCGAAA AGCTGCACCG GCTGGACCAT CGCGGGCCGT TCTTCCAGGT CGAGGGGCCG
CTGAACATCG CGCGCTCGCC GCAGGGCCAG CCGGTCATCT TCCAGGCCGG AGCATCCGAG
GACGGGCGCA ACTTCGCCGC CGCGCGCTCG GATGCGATCT TCGTGCAGGA CGACGACCTG
CTGTCCGCCA GGGCCTATTA CGCCGACGTG AAGCGCCGCG CGGCAGGCTT CGGCCGCAAC
CCGGCGGATC TGTTCGTTCT GCCGGGGCTG CGCCCGGTCA TCGGCTCGAC CGAGGAGGAG
GCCGAGCGCA AGTATCGGGA TTTCATCGCC CTGACCTCGA TCGAGGATGC GCTGCTGATC
ATGGCGCGGT CCTTCAACGA GCACGACTTT TCGCAATACG ATCTGGACGC CCCCTTTCCT
GAGGTCGAGC GCTTCGCGCA GAACTCGAAC CGCTCGACCT CGGGACGAGT GATCCGGCTG
GCGCGCGAGG GCAACCTGAC CCTGCGCGAG ACGGCGCAGC GTTTCGCCAC GCCGCGCACC
GATTTCGTCG GCACGCCCGA GCAGGTCGCC GATGCCTTCG AACGCTGGTT CCTGGAGCCC
GCGGCGGACG GCTTCGTCTA TAACAACTCG TTGCCGGACG AGCTTTCGGT CTTTGCCGAA
ACCGTCATTC CCATCCTGCA GGACCGCGGG CTGTTCCGCC GCGAATACGA AGGCACCACC
TTCCGCGATT CGCTGGGGCT GGCCAAACCC GTGAACCGCC ACACCTCCCG GCGCATCGCG
GCCGAGTGA
 
Protein sequence
MGARRLKLGF MMHGNGTGWG DWRHPAAHPG ASTDFGYYRR QAQVAEAAKF DFLFVADSVH 
ITPKSSPHYL NRFEPLTILS ALAAVTDRIG LVGTLTVSYA EPYNVARQFA SLDHISGGRA
GWNVVTSWLE GSARNFSRDK HYDHATRYRL AAEHLDVVQG LWDSWEDDAL VHDKASGRFF
DPEKLHRLDH RGPFFQVEGP LNIARSPQGQ PVIFQAGASE DGRNFAAARS DAIFVQDDDL
LSARAYYADV KRRAAGFGRN PADLFVLPGL RPVIGSTEEE AERKYRDFIA LTSIEDALLI
MARSFNEHDF SQYDLDAPFP EVERFAQNSN RSTSGRVIRL AREGNLTLRE TAQRFATPRT
DFVGTPEQVA DAFERWFLEP AADGFVYNNS LPDELSVFAE TVIPILQDRG LFRREYEGTT
FRDSLGLAKP VNRHTSRRIA AE