| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_5006 |
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| Symbol | |
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| ID | 4583567 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008688 |
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| Strand | - |
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| Start bp | 516542 |
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| End bp | 517513 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639772309 |
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| Product | aliphatic sulfonate ABC transporter periplasmic ligand-binding protein |
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| Protein accession | YP_918762 |
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| Protein GI | 119387728 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.523534 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCCAA TCTCTCGTCG CGGATTCGGT ACGCTTCTGG CGGCCGCCGC ACTGGCGCTG
GCCACGCAGG CGGGCGCGCA GGATCTGTCC GGCGTCACCC TGCGCGTCGG CGACCAGGTG
GGCGAGCAGC GCGCCCGGCT CGAGGCCGCA GGGCTGCTGG ACGACCTGCC CTACAAGATC
GAATGGTCGG TCTATCCGGC CGCGGTGAAC CTGCATGAGG CGCTGAAGGC CGAGGCGGTG
GACATCGGCA TGTCCGCCGA CAGCCCGGCG GTCAGCGCCA TCGCCGGCGG CTCCAGGATC
AAGATCGCCG CGGCCTTCCA CAACGGCGGG CTGGGCACCT CGATCATCGT GCCCAAGGAC
AGCCCGATCC AGAGCATCGG GGACCTGAAG GGCAAGACCA TTTCGCCCAC CACCCGGGGC
AGCGTGGCGC ATTACCTGAC CCTGGGCACG CTGAAGAATG CCGGGATCGA TCAGCAGGAC
GTCAAGCTGG CTTTCCTGAC CCCGGCCGAC GCCTCGGCGG CCTTCCAGTC CGGCGGGATC
GACGCCTGGG CGATCTGGGG CATCTACAAG GCGCGCAGCA TCGGCGTGCT TGGTGCCCGC
GAGCTTTACG ATGGCCAGGG CGTGAACACC GGCAATATCG TCTATGCCGT GACCGAAAAG
ACCCTCGGCG ACCCGGCGAA GATCGAGGCG ATCAAGGATT ACCTGGCCCG GATCGAGAAA
AGCTACGAAT GGGCCCGCGA GAACCGCGAG GATTTCCTGA CCTTCTACGA AGGCTTCAGC
AAGCAGGACC GCGCCACCGT CGAGCCGCTT TACGCCGAGC AGACCGCCTA CAAGCGGCTG
CCCATCGACG ACGCCTTCGT CGCCAGCCTG CAGAACGTCT TTGCCACCTG GGTCGAGGCC
GGGGTGCTTG ACGGATCGCT GGACCTGTCG GCCCATGTCT ATCGCGACCC GCCCGTCATC
GCGCTGAACT GA
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| Protein sequence | MTPISRRGFG TLLAAAALAL ATQAGAQDLS GVTLRVGDQV GEQRARLEAA GLLDDLPYKI
EWSVYPAAVN LHEALKAEAV DIGMSADSPA VSAIAGGSRI KIAAAFHNGG LGTSIIVPKD
SPIQSIGDLK GKTISPTTRG SVAHYLTLGT LKNAGIDQQD VKLAFLTPAD ASAAFQSGGI
DAWAIWGIYK ARSIGVLGAR ELYDGQGVNT GNIVYAVTEK TLGDPAKIEA IKDYLARIEK
SYEWARENRE DFLTFYEGFS KQDRATVEPL YAEQTAYKRL PIDDAFVASL QNVFATWVEA
GVLDGSLDLS AHVYRDPPVI ALN
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