Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_5004 |
Symbol | |
ID | 4583565 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008688 |
Strand | - |
Start bp | 514961 |
End bp | 515698 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639772307 |
Product | ABC transporter related |
Protein accession | YP_918760 |
Protein GI | 119387726 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.472634 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGACCC AACTTCACCG GAGCCTGAAA ACACCCGCGG CCGTCGCGGT GCGGGGGCTC AGCCGCGCCT TCGGCCCGCG CCGGGTGATC GACAACCTGG ACCTTGCCAT CCGGCCGGGC GAATTCGTCG CGCTGCTGGG CGCCTCGGGC TGCGGCAAGT CCACGCTGCT GCGCATCCTG GGCGATCTGG ACCCGGAGTT CGAGGGCGAG GTGGTGGTGC CTTCGCGCCG CGCCATCGCC TTCCAGGCGC CGCGGCTGAT GCCGTGGAAG CGGGTCTGGC ACAATGTCGT CCTGGGCTTG CCGGGCCGCC CCGACCGAAA ACGGGCCGAG CGCGCGCTGG ACGAGGTCGG CATCGGTCAT CGCGCCGATG TCTGGCCCAA GGTGCTGTCG GGCGGCGAGG CACAGCGCGC CGCCCTGGCG CGGGCGCTGG TGCGGGAACC CGACCTGCTT TTGCTGGACG AACCCTTCGC CGCGCTGGAT GCGCTGACCC GGATCAAGGC GCAGGCCCTG GTGGCCGAAT TGTGGCAGCG CCACGGCTGC GCGATCCTGC TGGTCACTCA CGACGTCGAA GAGGCGATCC TGCTGGCCGA TCGGGTGCTG GTGATGAAAG AGGGCGTAAT CGCCCATCAC GAACCCATCG CGCTGGACCG GCCGCGCGAC GTGGCCGACC CCGAATTCGC CCGTATCCGC GGGGCGTTGC TGGACTGGCT GGGCGTGGCG CACGGGGCCG CGCATTGA
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Protein sequence | MATQLHRSLK TPAAVAVRGL SRAFGPRRVI DNLDLAIRPG EFVALLGASG CGKSTLLRIL GDLDPEFEGE VVVPSRRAIA FQAPRLMPWK RVWHNVVLGL PGRPDRKRAE RALDEVGIGH RADVWPKVLS GGEAQRAALA RALVREPDLL LLDEPFAALD ALTRIKAQAL VAELWQRHGC AILLVTHDVE EAILLADRVL VMKEGVIAHH EPIALDRPRD VADPEFARIR GALLDWLGVA HGAAH
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