Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_5001 |
Symbol | |
ID | 4583562 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008688 |
Strand | - |
Start bp | 513391 |
End bp | 513969 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639772304 |
Product | HupE/UreJ protein |
Protein accession | YP_918757 |
Protein GI | 119387723 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG2370] Hydrogenase/urease accessory protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.66529 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCATTG CGCTTACCCT GTTTCTGCTT CTCAGCCCGG CTGTGGCCCT TGCGCATCCC GGGCATCTGC ATGGCGGCGG CTTCGCCTCC GGTTTCTCGC ATCCCCTTCT GGGCCTGGAT CACGTCGTCG CCATGGTCGC CGTGGGTCTT TGGGCCGCCT CATTGGGAGG GGCCGCCGCG CCGATCCTCC TCCTGGCCTT TCCGCTGGCG ATGATGGCGG GCGGATTGCT GGGCGCGGCG GACGTCCCCC TTCCCGCTGT CGAGGCGGGG ATCGCCGCCT CGTCCATCGT GATCGGGGTC GCCGTCATGC TGGCCCTGCG TCCGCCGCTA TGGGCGGCTG GCCTGGTCGT TGCGGCCTTT GCCGTTTTCC ACGGCCATGC GCACGGCACC GAGATGCCTG CCGCCGGCAA TCTCGCGCCT TATGCGGCGG GGTTCGTGCT GGCGACGCTT CTGCTGCATC TGGCGGGTCT TGGCATCGGC AGGGTGGGGC GCCTGCATCC GGGGCCGATG CTGTCGCGTG GGCTGGGCGC GGTCATCGCG CTCGTCGGGT CGTTCGCGCT TGGCGGGCTG GCCGGATGA
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Protein sequence | MRIALTLFLL LSPAVALAHP GHLHGGGFAS GFSHPLLGLD HVVAMVAVGL WAASLGGAAA PILLLAFPLA MMAGGLLGAA DVPLPAVEAG IAASSIVIGV AVMLALRPPL WAAGLVVAAF AVFHGHAHGT EMPAAGNLAP YAAGFVLATL LLHLAGLGIG RVGRLHPGPM LSRGLGAVIA LVGSFALGGL AG
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