Gene Pden_4978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4978 
Symbol 
ID4583539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp487868 
End bp489118 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content55% 
IMG OID639772281 
Producthypothetical protein 
Protein accessionYP_918734 
Protein GI119387700 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.156793 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAACC GTATCGCTCT GATTTTGGCC GCAACCACTT TTCTTGCATC GCCCGCTTTT 
TCTGGCGGCT ACGTCGCTCC GGTGATCCAA CCGCAAATCA GCCCGGTCGT GGAAGTCGCC
CGCCCGGCAT TCAGTTGGAC TGGTCCTTAT GTCGGCGCTT ACATCGGAAA TACCAAACTC
GATCTGAAGT CGACTGGTGA AATCCACCAT GATGCCATTA CGGTCGAGCA CGACGCCATT
ACCGAGGAAA TCCCCGCCGA AGTCATCGAA CATCCCGAAG TCACCGAAGA CCGGGTTGTC
GAGGTGATTG AACACCCCGA AGTCACCGAG GAAAAGGTCG TCAAGGAGAT CGACCATCCG
GCGATCGTCG AGAAAATCCC TGCGGTGACA AAAGAACATC CAGAGGTGAA GGAAAAGGTA
ACGGTCGGCT GGGAAGAGGT TCAGATCGGA ACTGAAACGG TAAAAGTCAG GGAAGACGTA
TACCGCGATG AAAATGGCGA AAAACAACGG GATGAAAATC ACCATACCGG CTGGCGCCAT
GTCCCCGTCT ATGAAGAAGT TCCGGTCTAT GAAAATCGTC CCATCTATGA GGAACGGGTA
GTTCAGGATG CATGGGTCGA AGTGATCTCG CCTGAAAAAG AGGTCGTGAT CAAGGATGCC
TGGACCGAAA CCGTCACCGA AACCGTCGTG GTCCAGGAGG CATGGGTCGA AGAAGTCACC
GAGACCGTCG TGGTGCAGGA AGCCCGGACC GAGATCGTGA AACCCGCCAG GACTGTCGTG
GTGCAGGAAG CATGGACCGA GGTTGTCCGT GAAGCGTGGA CCGAACAGCT CACCGATAGT
TTCAGCGAGG ATGGCAATAG CTATGGCCTG TTCGCGGGCT ATCGCCGCCA ATGGCAGAAC
AACTTTGTCG GTGGTATCGA AGTCCACTAC GGAAGGAACG GCTCTAACCG ATTCAACCTC
GCGGAACTTG GAGGGACGGT GCAATTCGGC AAGGATACCT ACGGCGCCGA ACTTCAGGCG
GGTTATGCGA TCAAGCGCGC GTTGCCGTAT ATTGCCGTGG GCTATGCCAA CATCCTGGAT
CAGGATGCCA TGACCGTATC GCTAGGGCTG GATTATGCCG TTACCGACCG CCTGATCGTC
GGCGCCAAAT ATACCCATTA CGATATCGGC GATATCAGTG GAATCGACAG CATTCATCGG
TTCGAGGGCG ACGGCAATAT GGTCAGCCTG CGCGCAGCGA TCAAGTTCTG A
 
Protein sequence
MSNRIALILA ATTFLASPAF SGGYVAPVIQ PQISPVVEVA RPAFSWTGPY VGAYIGNTKL 
DLKSTGEIHH DAITVEHDAI TEEIPAEVIE HPEVTEDRVV EVIEHPEVTE EKVVKEIDHP
AIVEKIPAVT KEHPEVKEKV TVGWEEVQIG TETVKVREDV YRDENGEKQR DENHHTGWRH
VPVYEEVPVY ENRPIYEERV VQDAWVEVIS PEKEVVIKDA WTETVTETVV VQEAWVEEVT
ETVVVQEART EIVKPARTVV VQEAWTEVVR EAWTEQLTDS FSEDGNSYGL FAGYRRQWQN
NFVGGIEVHY GRNGSNRFNL AELGGTVQFG KDTYGAELQA GYAIKRALPY IAVGYANILD
QDAMTVSLGL DYAVTDRLIV GAKYTHYDIG DISGIDSIHR FEGDGNMVSL RAAIKF