| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4970 |
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| Symbol | |
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| ID | 4583531 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008688 |
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| Strand | - |
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| Start bp | 477977 |
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| End bp | 479017 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639772273 |
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| Product | 3-isopropylmalate dehydrogenase |
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| Protein accession | YP_918726 |
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| Protein GI | 119387692 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR02089] tartrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.736304 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0918819 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACCC ACAAGATCGC CCTCATCCCC GGAGACGGCA TCGGGACCGC CGTGACCGAG
TCGGCCGTCG CCGTTGCCCG GGCTGCGGGC GCCGTGCTGG AAACCACGAC CTTCCCGTGG
TCCTGCGACC ACTACCTGCA AACCGGCAAG ATGATGCCCG AGGACGGGAT CGAGACCCTG
CGCGGCTTCG ACGCCATCTT CCTTGGCGCG GTCGGCTGGC CCGCCAAGGT GCCCGACAGC
GTGTCCCTGC ACGGGCTGCT GCTGCCGATC CGCAAGGCCT TCGTGCAATA TGCCAATATC
CGCCCGCACC GCCTGCTGCC CGGTGTCGAG GGGCCGCTGA AGACCCGCGA TTTCGACATC
CTCTGCATCC GCGAGAATAC CGAGGGCGAA TATTCCGGCG CCGGCGGGCG CGTCCATGTC
GGCACCCCGG ACGAGGTGGC GGTGGAAACC TCGATCTTCA CCCGCGCGGG CGTGGAACGG
ATCATCCGCT TCGGCTTCGA GCAGGCGATG CGACGGCGGG GGAAGCTGGC CTCGGTCACG
AAATCCAATG CGCAGAAATA TTCCATGGTG TTCTGGGACG AGATCACCGA CCGGCTGGCT
GCCGAATATC CGCAGGTCGA GGTGACGCAT TACCATATCG ACGCGATGTG CGCGCGCATG
GTGATGGCGC CGGAAAGCCT GGACGTGGTG GTGGCCTCGA ACCTTTTCGG CGACATCCTG
ACCGACCTGG GCGCGGCGAT CCAGGGGGGG TTGGGCTTTG CGGCCTCGGC CAATATCAAC
CCCGACCGCT CGGCGCCCTC GATGTTCGAG CCGGTGCATG GCTCGGCCCC CGACATCGCG
CATCTGGGCA TCGCCAATCC GATGGCGGCG ATCTGGTCGG TGGCGATGAT GCTGGATCAT
CTGGGCGAGG CCGCGACCGC CGCCCGCATC ATGGCGGCGA TGGAGGCGGT GACCGCGCAG
GGCATCGGCA CCGTTCCGGG CCGCGACAAG ACCGACGACA TCACCAAGGC CGTTCTGGCC
GCGCTGGAGG GCAAGGCATG A
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| Protein sequence | MTTHKIALIP GDGIGTAVTE SAVAVARAAG AVLETTTFPW SCDHYLQTGK MMPEDGIETL
RGFDAIFLGA VGWPAKVPDS VSLHGLLLPI RKAFVQYANI RPHRLLPGVE GPLKTRDFDI
LCIRENTEGE YSGAGGRVHV GTPDEVAVET SIFTRAGVER IIRFGFEQAM RRRGKLASVT
KSNAQKYSMV FWDEITDRLA AEYPQVEVTH YHIDAMCARM VMAPESLDVV VASNLFGDIL
TDLGAAIQGG LGFAASANIN PDRSAPSMFE PVHGSAPDIA HLGIANPMAA IWSVAMMLDH
LGEAATAARI MAAMEAVTAQ GIGTVPGRDK TDDITKAVLA ALEGKA
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