Gene Pden_4967 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4967 
Symbol 
ID4583528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp474442 
End bp475719 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content68% 
IMG OID639772270 
ProductFAD dependent oxidoreductase 
Protein accessionYP_918723 
Protein GI119387689 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0475952 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTTC AGTCCTATTG GCACGACACC GCGCCCGCAT TCGCCTCGGG TGCGCCGGGG 
CCCGTCTCCG GCCAATACGA CGTGGCGGTG ATCGGCGCGG GCTTTACGGG CCTCGGGGCC
GCGCGCAAGC TGGCCGCCGA AGGGCATTCG GTCGTCGTGC TGGAGGCCGA GACGGTCGGC
TTCGGGGCAT CGGGGCGCAA TGGCGGGCAC CTGAACAACG GCATCGCCCA CAGCTATCTG
GCTGCGCGCG AGCATTTCGG CGCGGACAGG GCACGGGCGC TTTATCATGC CTTCGACCAG
GGCATCGAAA CCATCGAGCG CATCATCGCC GAAGAGGGGA TCGACTGTTC CTTTCGGCGC
TCGGGCAAGC TGAAGCTGGC CTCGAAACCC GGCCATTACG ACAGCCTTGC CCGCAATTTC
GAGGCGCTGC ACCGCGACGC CGATCCCGAT ACCGCGATGC TGTCGCGGGC GGAACTGGCG
GGCGAGGTCG GCTCGGACGC CTTTCACGGC GCGATGCTGC AAAAGAAAAG CGCGATGATG
CATATGGGCC GCTTCGTCGT GGGGCTGGCC GAGGCGGCCG CGCGGCGCGG CGCGGCGATC
TTCGAACGCG CCCCGGTCAT CGCGCGCGAG CAGGCCGGCG CGGGCTGGAA GCTGACCACG
CCCAGGGGCA GCGTCACGGC GGGCAAGGTG CTGCTGGCGA CCGGCGCCTA TACGACCGGC
GCCTTTCCAT GGTTTCGCCG CCGCATCGTG CCGGTCGGCA GCTTCATCAT CGCCACCCGC
CCCCTGACGG ATGCCGAGGT CGCGGCGACG ATGCCGGGCA ACCGGACCTG CGTGACCTCG
ATGAATATCG GCAACTATTT CCGCCTTGCG CCGGACAACC GGCTGATCTG GGGCGGGCGG
GCGCGGTTCT CGGCGAGCTC GGACCAGCGC TCGGACGCCA AGAGCGGCGA GATCCTGCGC
GCGGGGCTGC TGCGCACCTT TCCGCAGCTT CGCGAGGTGC CGATCGACTA TTGCTGGGGC
GGGCTCGTGG ACATGACCGC CGATCGCTTT CCGCGCGCCG GGCAGGCGGA CGGGGTTTAC
TTCTCGATGG GCTATTCCGG CCATGGCGCG CAGATCGCCA CCCATATGGG CGAGATCATG
GCCGACCTGA TGACCGGCCG TGCCAATCGC AATCCCTGGG ACGGGCTGCC CTGGCAGGCG
GTGCCGTTCC ATACCGGCAA GCCGTGGTTC CTGCCGCTGG TGGGCCTTTA CTACAAAACC
CTTGACCTTA TCCGCTGA
 
Protein sequence
MKFQSYWHDT APAFASGAPG PVSGQYDVAV IGAGFTGLGA ARKLAAEGHS VVVLEAETVG 
FGASGRNGGH LNNGIAHSYL AAREHFGADR ARALYHAFDQ GIETIERIIA EEGIDCSFRR
SGKLKLASKP GHYDSLARNF EALHRDADPD TAMLSRAELA GEVGSDAFHG AMLQKKSAMM
HMGRFVVGLA EAAARRGAAI FERAPVIARE QAGAGWKLTT PRGSVTAGKV LLATGAYTTG
AFPWFRRRIV PVGSFIIATR PLTDAEVAAT MPGNRTCVTS MNIGNYFRLA PDNRLIWGGR
ARFSASSDQR SDAKSGEILR AGLLRTFPQL REVPIDYCWG GLVDMTADRF PRAGQADGVY
FSMGYSGHGA QIATHMGEIM ADLMTGRANR NPWDGLPWQA VPFHTGKPWF LPLVGLYYKT
LDLIR