Gene Pden_4966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4966 
Symbol 
ID4583527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp474080 
End bp474433 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content66% 
IMG OID639772269 
Productprotein of unknown function DUF861, cupin_3 
Protein accessionYP_918722 
Protein GI119387688 
COG category[R] General function prediction only 
COG ID[COG3450] Predicted enzyme of the cupin superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0418481 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCTTT TGCAGACCAT CGACCCATCG ACCCTTCCCG CCGGCGCGCC GGGCAAGGCG 
GCCCCCGACC GGCTGGTTTC GGGCGATCCC TCGTTCATGA CCTGGGCGCT GGACGCCTCG
CGGGGCGGCG AGGTGCGCAC CGGCATCTGG GAGGCGACGC CGGGCGAGAC CATCTCGATC
AAGGGCGAGA GCTTCGAGTT CTGCCATATC CTGGACGGCG TGGTCGAACT GACCGAGGAC
GGCCAGCCGC CCGTCACCTA TCGCAAGGGC GACAGCTTCA TCATGAAGCC CGGCTATCGC
GGCGTCTGGA AGACTGTCGA AACCGTCCGC AAGATCTATG TCATCGTCGG ATGA
 
Protein sequence
MPLLQTIDPS TLPAGAPGKA APDRLVSGDP SFMTWALDAS RGGEVRTGIW EATPGETISI 
KGESFEFCHI LDGVVELTED GQPPVTYRKG DSFIMKPGYR GVWKTVETVR KIYVIVG