Gene Pden_4964 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4964 
Symbol 
ID4583525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp471739 
End bp473115 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content69% 
IMG OID639772267 
Producthypothetical protein 
Protein accessionYP_918720 
Protein GI119387686 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0693089 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0526808 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGCCA ATTCACTGGT CGAACTCGAC CGCGCCCATC TGATCCACCC CGTCGCAAGC 
TGGCGCGGGC ACGAGGCTGC GGGCGTGCGC CTGCTGGCCT CGGGCAAGGG CGCGCGCGTG
CGCGACGCGC AGGGGCATGA GCTGATCGAC GGCTTTGCGG GCCTGTGGTG CGTCAATGCC
GGCTACGGGC AGGACAGCGT GGTCGAGGCC GCGACGCAGC AGATGCGGGA GCTGGCCTAT
GCGACCGGCT ATTTCGGGCT GGGTTCGGAG CCGGCCGTGC GCCTGGCCGC GCGCCTGGCC
GAGGCTGCGC CGGGCGATCT GGACCATGTC TATTTCACGC TGGGCGGCTC GGACGCGGTG
GACAGCACCG TGCGCTTCAT CCGCTATTAC TGGAACGCGC GCGGGATGCC GGGGAAGGAC
CAGTTCATCT CGCTGGAGCA GGGCTATCAC GGTTCTTCGA CCGTGGGGGC GGGGCTGACC
GCGATCCCCT CGTTCCATGC GGGTTTCGGC GTGCCTTATG ACTGGCAGCA CAAGATTCCG
TCGCATTACA GCTATCGCAA CCCCGCAGGC AGCGACGATG CCGCGATCAT CGAGGCGTCC
AGGGCGCAGT TGCTGGCCAA GGTCGCCGAG CTGGGCGGTC CCGAACGGGT CGCGGCCTTC
TATGCCGAGC CGATCCAGGG CTCGGGCGGG GTGCTGGTGC CGCCCAAGGG CTGGATGCGT
GCGATGCGCG ATCTGTGCGC GGAACTCGAC ATCCTTTTCG TCGCCGATGA GGTCATCACT
GCCTTCGGCC GCACCGGCCC GCTTTTCGCC TGCGAGGAAG AGGGCATCGT CCCCGACCTG
ATCACCGCCG CCAAGGGGCT GACCTCGGGC TATGTGCCGA TGGGCGCGGT GTTCATGTCG
GATCGCGTCT ATCAGGTGAT CGCCGATGGC GCGGGCGCCG CGGCGGTGGG GCACGGCTAT
ACCTATTCGG CGCATCCGGT CTCGGCCGCC GTCGGGCTGG CGGTGCTGGA CCTCTACGAG
GGCGGATTGC TGGAAAACGG CCGCAGGATG GGCGCCCGGC TGATGGAGGG GCTGCGCGGC
CTTGGCGACC ACCCGCTGGT GGGCGATGTG CGCGGGCGCG GCATGCTGGC GGCGATCGAG
CTGGTGACCG ACAAGGCGGC GAAGACCCCG CTGCCGGCTG CCAGCCAGCC CGCGACGCGC
ATTTTCGACC GCGCCTGGGA TCAGGGGCTG GTCATCCGCG CCTTTGGCTG GGGCGTGATC
GGCTATGCCC CGCCGCTGTG CTGCACCGAG GAAGAGATCG ACCTGATCGT CGCCCGCACC
CGCAAGGTGC TGGACCTGAC GCTGGAGGAT CCCGATATCC GCGCGGCGCT GCGCTGA
 
Protein sequence
MLANSLVELD RAHLIHPVAS WRGHEAAGVR LLASGKGARV RDAQGHELID GFAGLWCVNA 
GYGQDSVVEA ATQQMRELAY ATGYFGLGSE PAVRLAARLA EAAPGDLDHV YFTLGGSDAV
DSTVRFIRYY WNARGMPGKD QFISLEQGYH GSSTVGAGLT AIPSFHAGFG VPYDWQHKIP
SHYSYRNPAG SDDAAIIEAS RAQLLAKVAE LGGPERVAAF YAEPIQGSGG VLVPPKGWMR
AMRDLCAELD ILFVADEVIT AFGRTGPLFA CEEEGIVPDL ITAAKGLTSG YVPMGAVFMS
DRVYQVIADG AGAAAVGHGY TYSAHPVSAA VGLAVLDLYE GGLLENGRRM GARLMEGLRG
LGDHPLVGDV RGRGMLAAIE LVTDKAAKTP LPAASQPATR IFDRAWDQGL VIRAFGWGVI
GYAPPLCCTE EEIDLIVART RKVLDLTLED PDIRAALR