| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4961 |
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| Symbol | |
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| ID | 4583522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008688 |
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| Strand | - |
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| Start bp | 468219 |
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| End bp | 469832 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639772264 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_918717 |
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| Protein GI | 119387683 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0376726 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0265573 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGACA GGGAAATCAC CAACTGGACC CGCGCCGACG ACGCGATGGT CGAGAACGCG
ATCCGCCGCG GCGCCAACCG CCGCGAATTG CTGCGCATGT TCATGGCGGG CGGCATCTCG
CTGGCCGTGG GCGGCACCGT CCTGGGACGC GCGACGGCCG CGCTGGCGCA GACGCCGGTT
TCGGGCGGGC ATCTGAAGGC GGCGGGCTGG TCGGCATCGA CCGCCGACAC GCTGGACCCG
GCCAAGGCCT CGCTTTCGAC GGATTACACG CGCTGCTGCG CCTATTACAA CCGGCTGACC
TTCATGAAGG AGGACGGCTC GATCGAGATG GAACTGGCCG ACAGCATCGA AAGCGGGGAT
GCGGCCGTAT GGACCGTCAA GCTGAAATCC GGCGTGACCT TCCACGACGG CAAGACGCTG
GAGGCCGAGG ACGTGGTGTT CTCGCTTCAG CGCCATCTCG ACCCGGCGGT GGGCTCCAAG
GTCAACTCGA TCGCCAAGCA GTTCAAGGAG ATCAAGGCGC TGGACCCGCA GACGGTGCAG
ATCACGCTTG AATCGCCGAA TGCCGACCTG CCGACCATCC TGGCGATGCA TCACTTCATG
ATCATCGCGA ACGGCACCAC CGATTTCTCG ACCGCGAACG GCACCGGCGC CTTCGTCTCG
GAAGTGTTCG AGCCGGGCGT CCGCTCGATC GGCAAGCGCA ACGAGAACTA TTTCAAGCCG
CAAAAGGCGC ATCTGGACAG CTTCGAATAT TTCGCCATTC CCGACGACAG CGCGCGGGTG
AACGCGCTGC TGTCCGGCGA CATCCAGTTC GCGGCCTCGA TCAAGCCGCA ATCGGTGCGG
CTGGTGGAAA GCCAGCCCGA TTTCGTGCTG TCCATCACCA CGGGCGGCAA CTACACCAAC
CTGAACGCGC GGATGGATCT GGCGCCGGGC GACAAGGCCG GCTTCGTGGA AGGCATGAAA
TACCTGATGA ACCGCGAGCT GATCCAGAAA TCGGCGCTGC GCGGCCTGGC CGAGATCGCC
AACGACCAGC CCGTCCCGCC GATGAGCCCG TTCCACAACG CCGAGCTGAA ACCGCGCGAA
TTCGACCCCG AGCGCGCGAA ATCGCTGTTC GAAAAGGCGG GCCTGCTGGG CCAGCCGATC
CCGGTGGTGG CGTCCGAGGC GGCGGCCTCG TCGCTGGACA TGGCGATGAT CTTCCAGCAG
GCGGGCGCCG AGATCGGCAT GCGCTTCGAC ATCCAGCGGG TGCCGTCGGA CGGCTACTGG
TCGAACTACT GGCTGAAGGC GCCGGTGCAT TTCGGCAATA TCAACCCGCG CCCGACGCCG
GACATCCTGT TCTCGCTGCT TTACGCCTCG GACGCGCCCT GGAACGAAAG CCAGTACAAA
TCCGAGAAAT TCGACCGTAT GCTGGTCGAG GCGCGGGGTG AGCTGGACAC CGCCAGGCGC
AAGGAGATCT ACGACGAGAT GCAGGTCATG GTCTCGAACG AGGCGGGGAC CGGCATTCCG
GTCTATATCT CGAACGTCGA TGCCCATGCG GGCAAGGTCA AGGGCCTGCT GCCCAACCCG
CTGGGCGGGC AGATGGGCTA TGCCATGGCC GAGTATCTGT GGCTGGAAGC CTGA
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| Protein sequence | MNDREITNWT RADDAMVENA IRRGANRREL LRMFMAGGIS LAVGGTVLGR ATAALAQTPV
SGGHLKAAGW SASTADTLDP AKASLSTDYT RCCAYYNRLT FMKEDGSIEM ELADSIESGD
AAVWTVKLKS GVTFHDGKTL EAEDVVFSLQ RHLDPAVGSK VNSIAKQFKE IKALDPQTVQ
ITLESPNADL PTILAMHHFM IIANGTTDFS TANGTGAFVS EVFEPGVRSI GKRNENYFKP
QKAHLDSFEY FAIPDDSARV NALLSGDIQF AASIKPQSVR LVESQPDFVL SITTGGNYTN
LNARMDLAPG DKAGFVEGMK YLMNRELIQK SALRGLAEIA NDQPVPPMSP FHNAELKPRE
FDPERAKSLF EKAGLLGQPI PVVASEAAAS SLDMAMIFQQ AGAEIGMRFD IQRVPSDGYW
SNYWLKAPVH FGNINPRPTP DILFSLLYAS DAPWNESQYK SEKFDRMLVE ARGELDTARR
KEIYDEMQVM VSNEAGTGIP VYISNVDAHA GKVKGLLPNP LGGQMGYAMA EYLWLEA
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