Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4960 |
Symbol | |
ID | 4583521 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008688 |
Strand | - |
Start bp | 467210 |
End bp | 468163 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639772263 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_918716 |
Protein GI | 119387682 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.138111 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0574372 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCCAC AGGTCGTCTC ACTGGTGCTG GGCCGCCTCG GCGTCGCCGT CATCACGCTT GTCATCGTGA GCTTCATCGT TTTCGCCGCG ACCGAGATGT TGCCCGGCGA CATCGCGCAG ATCCTGCTGG GGCAGGCGGC GACCCCCGAG GCCGTCGCCG GCCTGCGCGA GGCCATGCAT CTGAACGATC CCGCCATCCT GCGCTTCCTG CGCTGGCTGG GCGGGCTGCT GCAAGGCGAT CTGGGCAAGT CCTATGCCAA CAACATGCCC GTGGCCGACC TGATCGGCGG CCGGCTGGCC AATACGCTGA AGCTGGCGGC GGTGACCTCG ATGTTCGCGG TTCCGGTGGC GTTGTTCCTG GGCATCACCA CGGCGATGTA TCGCGGCAGC CTCTACGACC GGGCGGTGAA CACGCTGGTC GTCGGCGTCA TCTCGGTGCC CGAGTTCATG ATCGCCACCC TGGCGGTGCT GGTCTTCGCG GTCTGGCTGC ACTGGCTGCC CGCCCTGTCC TTCACCGGCG ACACCACCAC GCTGATGGGC CTGCTGAAGG CCTATGCCAT GCCGGTCATC ACGCTGAGCT TCGTGATCTC GGCCCAGATG ATCCGCATGA CCCGCGCCGC CGTGGTCGAG ACGCTGAAGA TGCCCTATGC CGAGATGACG CTGCTGAAGG GCGCCTCGAA GCCGCGCATC GTGCTGCGCC ATGCGCTGCC CAACGCCATC GGTCCCATCG TGAACGCGGT CGCGCTGTCG CTGTCCTATC TGCTGGGGGG CGTCATCATC GTCGAGACCG TGTTCAACTA TCCCGGCATC GCCAAGCTGA TGGTCGATGC GGTCTCCACT CGCGACCTGC CGCTGATCCA GACCTGCGCG ATGATCTTCT GCCTTGGCTA CCTGATCCTC ATCACCATCG CCGATGTCAT CGCCATCGTC TCGAACCCGA GGTTGCGCAA GTAA
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Protein sequence | MNPQVVSLVL GRLGVAVITL VIVSFIVFAA TEMLPGDIAQ ILLGQAATPE AVAGLREAMH LNDPAILRFL RWLGGLLQGD LGKSYANNMP VADLIGGRLA NTLKLAAVTS MFAVPVALFL GITTAMYRGS LYDRAVNTLV VGVISVPEFM IATLAVLVFA VWLHWLPALS FTGDTTTLMG LLKAYAMPVI TLSFVISAQM IRMTRAAVVE TLKMPYAEMT LLKGASKPRI VLRHALPNAI GPIVNAVALS LSYLLGGVII VETVFNYPGI AKLMVDAVST RDLPLIQTCA MIFCLGYLIL ITIADVIAIV SNPRLRK
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