Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4958 |
Symbol | |
ID | 4583519 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008688 |
Strand | - |
Start bp | 464707 |
End bp | 466368 |
Gene Length | 1662 bp |
Protein Length | 553 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639772261 |
Product | ABC transporter related |
Protein accession | YP_918714 |
Protein GI | 119387680 |
COG category | [R] General function prediction only |
COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.129875 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAGTT TTGTTGAAAT CCGCGATCTG AAACTGGGTG CCGTGACCGA TTCCGGGCGC GACATCGACA TCATCAAGGG CGTCAGCTTC GACATCGCCG AGGGCGAGAT CGTCGCGCTG ATCGGCGAAT CCGGCTCGGG CAAGACCACC ATTGCCATGA CGCTGATGGG GCATTGCCGG CCCGGCTGCT ATGTCCAGTC CGGCGCGGTG GTGGTGGACG GCAAGGACAT GGTGCAACTG TCCGAGCGCC AGCGCGCTGC GATGCGCGGC ACCGAGGTGG CCTATGTCCC GCAAAGCGCC GCCGCCGCCT TCAACCCCTG CAAGCGGCTG CTGGACCAGG TGGTCGAGGT GGCGCGCATC CACAAGCTGA TGCCGATGGA CCAGGCCCGC GCCAAGGCGG TCGAACTGTT CCGTGCCCTG GCGCTGCCCG ATCCCGAAAC CATCGGCCAG CGGTATCCGC ATCAGGTCTC GGGCGGGCAG TTGCAGCGGC TTTCGGCGGC GATGGCGCTG ATCGGCGGTC CCAAGCTGGT GATCTTCGAC GAGCCGACGA CCGCGCTGGA CGTGACCACC CAGATCGAGG TTCTGCGCGC CTTCAAATCC GTGATGACGG CGGGGGGCAT GGCCGGGGTC TATGTCAGCC ACGACCTGGC GGTGGTGGCC CAGATCGCCG ACCGCATCGT CGTGCTGCGC GGCGGCGAGG TGCAGGAGGT GGGCACGACC CAGCAGATCC TGCACGATGC CCAGCACCCC TATACCCGCG AATTGCTGGC GGCCTTCCAT CCCGTGCCGC ATGCCGCGGT GGCACCGGCG CCCCAGGCGG CGCCCGTGCC GGCGCTGGAG GTCGTCGGCG TCACCGCCGG TTATGGTCCG GTGGATGCCA GCGGCGTGCC CCACAAGCTG GCCTTGCGCG ATGTCGGCTG CGCGCTGGAA AAAGGCCGCA ACCTGGGCGT GATCGGCGAA TCCGGCAGCG GGAAATCCAC GCTGGCGCGG GCGATCGCCG GGCTGTTGCC GCCGTCCTCG GGTTCGATCC TGCTGGGCGG AAAGGTGCTG GCCGGCGATG CGCGGCAGCG CAGCAAGGAC GAATTGCGCC GCTTGCAGAT CGTGTTCCAG CTTGCCGATA CCGCGCTCAA CCCCGCGCGG CCGGTCGGCG ACATCCTGGG CCGGCCGCTG AGCTTCTATC ACGGCATGAA GGGCGCTGCC CGCGAGGCGC GGATCGTCGA GCTGCTGGAC ATGGTGCGCC TGCCCGCCGC CATGCGCCAC CGCCTGCCGG GCGAGCTGTC GGGCGGCCAG AAGCAGCGCG TCAACCTGGC CCGCGCGCTT GCCGCCAACC CCGAGGTGAT CCTGTGCGAC GAGATCACCT CGGCGCTGGA CACGGTCGTG GCCGCCGCGG TGATCGAATT GCTGAAGGAA TTGCAGCGCG AGCTGGACCT GTCCTATGTC TTCATCAGCC ACGACCTGTC CACGGTCCAG GCGATCTGCG ACGAGGTGAT GGTCATGTTC GCCGGCGAGA AGGTCGAGCA CCTGCCCGCC GACCGCATCC ATGGCGGTGC GCAGCATGCC TATTCCCGGC TGCTGTTCGC CTCGGTTCCC AAGCTGGATA CCGGCTGGCT GGACGGGCTG TCGCGCGACC CCGAATTCAG CGCCGCCCTT GCGCGGCGCT GA
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Protein sequence | MASFVEIRDL KLGAVTDSGR DIDIIKGVSF DIAEGEIVAL IGESGSGKTT IAMTLMGHCR PGCYVQSGAV VVDGKDMVQL SERQRAAMRG TEVAYVPQSA AAAFNPCKRL LDQVVEVARI HKLMPMDQAR AKAVELFRAL ALPDPETIGQ RYPHQVSGGQ LQRLSAAMAL IGGPKLVIFD EPTTALDVTT QIEVLRAFKS VMTAGGMAGV YVSHDLAVVA QIADRIVVLR GGEVQEVGTT QQILHDAQHP YTRELLAAFH PVPHAAVAPA PQAAPVPALE VVGVTAGYGP VDASGVPHKL ALRDVGCALE KGRNLGVIGE SGSGKSTLAR AIAGLLPPSS GSILLGGKVL AGDARQRSKD ELRRLQIVFQ LADTALNPAR PVGDILGRPL SFYHGMKGAA REARIVELLD MVRLPAAMRH RLPGELSGGQ KQRVNLARAL AANPEVILCD EITSALDTVV AAAVIELLKE LQRELDLSYV FISHDLSTVQ AICDEVMVMF AGEKVEHLPA DRIHGGAQHA YSRLLFASVP KLDTGWLDGL SRDPEFSAAL ARR
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