Gene Pden_4944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4944 
Symbol 
ID4583505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp450315 
End bp451409 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content67% 
IMG OID639772247 
ProductABC transporter related 
Protein accessionYP_918700 
Protein GI119387666 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCCCA TGTCCGATGA TGCCATTCAA GTCCGGCGAG TCATGAAAAG CTACGGCACC 
ATGCTGGCCG TGGACGATGT CTCGTTCAAC GTCGCCGAGG GCGAGTTCGT CTCGCTCCTC
GGCCCAAGCG GCTGCGGCAA GACCACCACG CTGCGCATGA TCGCCGGTTT CACCGACACC
TCGGGCGGTG CGATCCGCGT GCATGGCCGC GAGGTCACCC ACCTGCCGCC CGAAAAGCGC
GACCTGGGCT TCGTGTTCCA GAACTATGCG CTGTGGCCGC ATATGACGGT CGCCGAGAAC
GTGGCCTTCG GGCTGAAGCT GCGCCGCAAG CCGCGGGATG TCATCCGCAA CAAGATCGAA
GAGGCGCTGT CCGTCACCGG CCTCTCGGGT TACGAGGACC GGCTGCCGCG CCAGCTTTCG
GGCGGGCAGC AACAGCGGGT GGCGCTGGCC CGCGCGCTGG CGCTTGAGCC GCAGGTGCTG
CTGATGGACG AGCCGCTGTC GAACCTCGAC CGCGCGCTGC GGGTGGTCAT GCGCCGTGAA
CTCAAGGAGT TGCAGGCGCG CATGAAGATG ACCACGCTTT ATGTGACCCA TGACCAGGAA
GAGGCGCTTT CGATGTCGAA CCGGGTCGTG ATCATGAACG GCGGCCGCGT CGAGCAGATC
GCGGCGCCCT ACGAGCTTTA CGAAAATCCG GCCACGCGCT TCGTCGCGGA TTTCGTGGGC
ATCACCAATT TCCTGGAAGG CACCGCCAGC GACATGGGCG GCGGCATGGT CGGGGTGCGG
CTGCCCTCGG GCCAGGTGCT GCACGCCCAG GCGCGGGTGC CGGTCGCGCA AGGAGGCGCC
GTGCGCGCAT TGATCCGCCC CGAGCGGGTG ACGATTTCCC CGGCCGAGCT TTCGGGGCCG
AACGTGCTGG CCGGCCGGGT CGAGCTTTCG GAATATTTCG GCGCCGTGCT GCGCTATACC
GTCCGGCTCG ACAGCGGCGA GATCCTGCGC GCGGAAGTGC ATAACTTCGA CGAATTCATC
GCCGGCGGCA GCAGGGTCTG GATCTGCACG CTGCCCGAAC ACCTGCGGGT GATCCCGCAT
GACCCGCGGG GCTGA
 
Protein sequence
MQPMSDDAIQ VRRVMKSYGT MLAVDDVSFN VAEGEFVSLL GPSGCGKTTT LRMIAGFTDT 
SGGAIRVHGR EVTHLPPEKR DLGFVFQNYA LWPHMTVAEN VAFGLKLRRK PRDVIRNKIE
EALSVTGLSG YEDRLPRQLS GGQQQRVALA RALALEPQVL LMDEPLSNLD RALRVVMRRE
LKELQARMKM TTLYVTHDQE EALSMSNRVV IMNGGRVEQI AAPYELYENP ATRFVADFVG
ITNFLEGTAS DMGGGMVGVR LPSGQVLHAQ ARVPVAQGGA VRALIRPERV TISPAELSGP
NVLAGRVELS EYFGAVLRYT VRLDSGEILR AEVHNFDEFI AGGSRVWICT LPEHLRVIPH
DPRG