| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4940 |
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| Symbol | |
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| ID | 4583501 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008688 |
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| Strand | - |
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| Start bp | 444877 |
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| End bp | 445641 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639772243 |
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| Product | histidine utilization repressor |
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| Protein accession | YP_918696 |
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| Protein GI | 119387662 |
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| COG category | [K] Transcription |
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| COG ID | [COG2188] Transcriptional regulators |
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| TIGRFAM ID | [TIGR02018] histidine utilization repressor, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.72224 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGGACGGTG CAGTGAATAC GGATCAGCCC CTTTACGAAC AGATCAAGAG CGCGATCGAT
CGCAGGATCG AGACCGAGGA ATGGCCGGCG AACTTCCAGG TGCCTTCGGA AGAGGATCTG
GCGGGCGAAT TCGGCGCCTC GCGGCTGACC GTGCGCCGGG CGCTGCGAGA GTTGCAGACC
GATGGCGTGC TGCTGCGCAT CCAGGGGCGG GGCACCTTCG TCATCGGGCC GCGGATGCAA
TGCGCGGTCT TCAACCTGCC CGACATCTCC GAGGAGATCG CCTTCTCGGG CGGCGCGCAT
TCCTGCCGGG TGCTTCAGCA TGCGATCCTG GGGCGCGACA GTCCGGGGCG CAACATGCTT
CAGCTTTCGC CGGACGACAC CGTCTTTCAC TCGCGCCTGC TGCATCTTGA GGACGGCACG
CCGATCCAGC TTGAGGATCG CTATGTGAAC GCTGCCGAGG CACCGGCCTA TCTTGAGCAG
GATTTCTCGC GCATCACGCC GCATAACTGG CTTTTGCGCG AGACCAGCGT GACGACCGTG
GACAACACGA TCCGCGCCAT CCGTGCCGAC GAAGAGGTGC GCAAGCATCT GCAGATCGAC
GAGAACCAGC CCTGCCTGCT GCTGGACCGT TCGACCTGGC GGGACGGCAT TCCCGTCACG
CGCAGCCGCT TCATCTATCC CGGCGACCGT TATCGCCTGC GCTCGACCCA TGAGGCGCGC
TCCAACCGCA TCGTGCCCAC GCTTCAGGGC GGAAAGACCC GCTGA
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| Protein sequence | MDGAVNTDQP LYEQIKSAID RRIETEEWPA NFQVPSEEDL AGEFGASRLT VRRALRELQT
DGVLLRIQGR GTFVIGPRMQ CAVFNLPDIS EEIAFSGGAH SCRVLQHAIL GRDSPGRNML
QLSPDDTVFH SRLLHLEDGT PIQLEDRYVN AAEAPAYLEQ DFSRITPHNW LLRETSVTTV
DNTIRAIRAD EEVRKHLQID ENQPCLLLDR STWRDGIPVT RSRFIYPGDR YRLRSTHEAR
SNRIVPTLQG GKTR
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