Gene Pden_4936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4936 
Symbol 
ID4583497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp441095 
End bp442210 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content71% 
IMG OID639772239 
ProductFAD dependent oxidoreductase 
Protein accessionYP_918692 
Protein GI119387658 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0618076 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTGG CCGGCGAACT GGTCGTCATC GGCGGTGGCC TGATCGGCGC GGCGCTTGCC 
TGGGGTGCTG CGCGGGCGGG TGCCGACGTG ACCCTGCTGG ACGAGGGCGA CATCGCCTTT
CGCGCCTCGC GCGGGAATTT CGGCCTGGTC TGGCTGCAGG GCAAGGGGCT TGGCCATCCC
GACTACATGC ATTGGTCGAT CCGTGCCGGC AGGCGATGGC CCGAGCTTGC CCGCATCCTG
GGCGAGGAAA GCGGGATCGA CATCGGCTGG CGCGGCGGCG GCGGGCTGCA TTTCTGCTGC
TCGGCAGAAG AGATGGAACA GCGCCGGGCG CTGATCGCCC GCACCCGTGC TGAAGCCGCC
GATATCAGCA TCGAGTTGCT TGACCGCGAA GCCCTGCGCG AGAGGGCGCC GGGCATCGGT
CCGCAGGTGC TTGGCGCCTC GCTTTCCGAC CTCGATGGCG AGGTCAGCCC GCTGTTCGCC
TTGCGCGCCT TTCACGAAGG GCTGGTCCGG CACGGCGGCC GGCTGCGGAC GAATTTCTCG
GCGCGCGAGA TCCGGCGGGA TCCGCATCGG GGCTTTGCGA TCCGCGATGC CTCGGGGGCC
GAGGTGACGG GCCGCCGGAT CGTCATCGCG GCCGGCCTTG GCGCCGATGC GCTGGCGCGC
CAGATCGGGC TGGAGCCGCG TCTGATGCCC GAGCGCGGCC AGATTGTGGT GACAGACCGG
GTGGCGCCCT TCCTGCACCA TCCTGCCAGC GCCATCCGCC AAAGCCGCGA GGGCACGGTG
CTGCTGGGCA GCACGCATGA GGATGCCGGC TTTTCGACCG CGACCGAGGT CGAGGCCATC
GCCCGGCTTT GCCGCATCGG CACGCGGCTG TTCCCGGCCC TGCGCTCGGC GCGTCTGGTC
CGGGCCTGGG CCGCGCTCAG GATCATGACG CCGGACGGCC TGCCGATCTA TGACGAATCG
CCCGAGATGC CGGGGGCATT CCTCGTCACC TGTCACAGCG GGGTCACGCT GGCGAGCCTG
CATGCGCTCG ACCTCGGCCC CGCCTTGGCC CGGGGCGATC TTGGCCCCGC CCCCCGATCC
ATGCGGAGTG CGCGCCTTGC CGTTCATCCG ACTTGA
 
Protein sequence
MSVAGELVVI GGGLIGAALA WGAARAGADV TLLDEGDIAF RASRGNFGLV WLQGKGLGHP 
DYMHWSIRAG RRWPELARIL GEESGIDIGW RGGGGLHFCC SAEEMEQRRA LIARTRAEAA
DISIELLDRE ALRERAPGIG PQVLGASLSD LDGEVSPLFA LRAFHEGLVR HGGRLRTNFS
AREIRRDPHR GFAIRDASGA EVTGRRIVIA AGLGADALAR QIGLEPRLMP ERGQIVVTDR
VAPFLHHPAS AIRQSREGTV LLGSTHEDAG FSTATEVEAI ARLCRIGTRL FPALRSARLV
RAWAALRIMT PDGLPIYDES PEMPGAFLVT CHSGVTLASL HALDLGPALA RGDLGPAPRS
MRSARLAVHP T