Gene Pden_4934 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4934 
Symbol 
ID4583495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp439421 
End bp440803 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content73% 
IMG OID639772237 
ProductBFD/(2Fe-2S)-binding domain-containing protein 
Protein accessionYP_918690 
Protein GI119387656 
COG category[R] General function prediction only 
COG ID[COG0446] Uncharacterized NAD(FAD)-dependent dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.261799 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGCT GGGACGCGAT CGTCATCGGT GCCGGCCCGG CCGGGATCGG CGGCGCCAGC 
CTGTTGGCCG AACGCGGCGC GCGGGTCCTG CTTGTCGACG AGACGCCCGG TCCCGGCGGC
CAGATCTGGC GCGGTATCGA GACCGTTCCC GAAAGCCGGG CCGCCATCCT TGGTCCCGAC
TATCGGGCCG GTGCGGCCGA GGTGGCGCGG CTGCGGGCCA GCGGCGCCAC GCTCGCCTTC
TCGACCGAGG CGTGGCGGGT CGAACCGGAC GGCACGGTCT GGCTCAGGGA TGCGGGCGGC
CTGCGCCGCG AAGCCGCGCG GCACCTGCTG GTCGCGACCG GCGCGATGGA GCGGCCGGTC
CCGCTGCCCG GCTGGACGCT GCCCGGGGTG ACCACCATCG GCGGCCTGCA GATCCTGCTC
AAGCGCGAGG GGCTGCTGCC CCGGGGGCCG CTTGCGCTGG TGGGGACGGG GCCGCTTGTC
TATCTTTATG CCGCGCAATG CCTGACGGCG GGCAAGCGCG ATCTGGTGCT GGTCGATACC
GCCCGACCGG GGGCCATGCT TGCGGCGCTG CCGCACCTGC CGCGCGCGTT GCTGGGGCAC
GGTCCGGCCT ATCTGGCCAA GGGCGCGGGG CTCTTGTGGC AGCTGCGCCG GGCGGGGATC
GCCGTCCATA CCAATGCCCG TCAGATCGGA ATCGAGCCCG ATGGGGACGG CGGCCTTGTT
CTGCGCTTTC TCGGCCGCGG CCGGCACAGG CTGCGGCTGT CCCGCATCGG CCTGCACGAA
GGCGTCATCC CTGAAACCCA TCTGCTGCGC AGCCTGGGAT GCCGGATGCT CTGGTCCGCG
GCTGCGGTCG CCTTCCATCC GGCGCGGGAC CGCGATCTGT GCAGCTCGCT CGGCCATGTC
CATGTCGCGG GCGATGCCGG CGGGGTCGGC GGTGCCATGG TGGCCTTGCT CGAAGGGCGC
ATCGCCGCCA TGGCCATTCT GGAACGGCTT GGCCATCAGG TCGATCCGCT GCTTGTTTCG
GCCACGCGCC GCGCGCGTCG CGCCCATCTT GCCGCGCGCC CGCTGATCGA GCGCCTTTAC
CGGCCTGCGC CGGAATTGCT GACGCCCCCG GACGAGGTGG TCGCCTGCCG CTGCGAAGAG
GTGCGCTGCG GCGAGATCCG GGCAAGCCTT GCCGCTGGCG CTGCCGGGCC GAACCAGCTC
AAGGCGTTCC TGCGCTGCGG CATGGGCCCC TGCCAGGGCC GGATCTGCGG CCCGACCCTG
GCCCAGTTGA CGGCCCGGAT ACGCGGCGTG ACCATGGAGG AGGCGGGCTG GCTGACCGTC
CGGCCGCCGC TTCGGCCGGT GAGTGTGGGC GAGATCGCCG CGCTGGCGAG CGAGGAGCCA
TGA
 
Protein sequence
MSRWDAIVIG AGPAGIGGAS LLAERGARVL LVDETPGPGG QIWRGIETVP ESRAAILGPD 
YRAGAAEVAR LRASGATLAF STEAWRVEPD GTVWLRDAGG LRREAARHLL VATGAMERPV
PLPGWTLPGV TTIGGLQILL KREGLLPRGP LALVGTGPLV YLYAAQCLTA GKRDLVLVDT
ARPGAMLAAL PHLPRALLGH GPAYLAKGAG LLWQLRRAGI AVHTNARQIG IEPDGDGGLV
LRFLGRGRHR LRLSRIGLHE GVIPETHLLR SLGCRMLWSA AAVAFHPARD RDLCSSLGHV
HVAGDAGGVG GAMVALLEGR IAAMAILERL GHQVDPLLVS ATRRARRAHL AARPLIERLY
RPAPELLTPP DEVVACRCEE VRCGEIRASL AAGAAGPNQL KAFLRCGMGP CQGRICGPTL
AQLTARIRGV TMEEAGWLTV RPPLRPVSVG EIAALASEEP