Gene Pden_4933 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4933 
Symbol 
ID4583494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp438858 
End bp439418 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content68% 
IMG OID639772236 
Producthypothetical protein 
Protein accessionYP_918689 
Protein GI119387655 
COG category[S] Function unknown 
COG ID[COG5589] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02444] conserved hypothetical protein TIGR02444 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.361826 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGCCG GCCCCAAAGG GAAATGCGCC GCCGAGAAAG ACGAGGCGAC GGCACTCTGG 
CCCTTCATGC TGAAGATCTA TGCCGCGCCG GGCGTGGCTC CGGCCTGCCT GCGCCTGCAG
GAGACATATG GGCTGGACAT CCCGCTGTTT CTCGCCGTCC TTCACGGCGC AGTTCTGGGC
AAGGCGCTGG ATGCCGCCGC CATCCGGGCA CTGGACGCCT CATGCGCGCA ATGGCGGCAA
GACGTGATCC GTCCGCTGCG CCGCATCAGG ACGGCGATGA AATCCGACGC CAGCCTGGCC
TGGAACCCGC GCGTGCCCGC CCTGCGCGAG GCGATCAAGG CGCAGGAGCT CACGGCCGAG
CGGATCGAGG CCGAGGTGCT GGATGCCCTG ATCCGGTCGC TTCCGCCAAC GGCGGGGCCT
GGCGGCGAGA AACCCCTGGA GGAAGCGGCA AGCCTTGTGC TGGACCTTCA AGCCCCGGAC
CGTGCCGCGC TGCTGCCCGA AGATGCCCGG CATGTTTGCG AAGCCCTGGC GGGGCTGGAG
AAAGGATGCG CATCGACCTG A
 
Protein sequence
MQAGPKGKCA AEKDEATALW PFMLKIYAAP GVAPACLRLQ ETYGLDIPLF LAVLHGAVLG 
KALDAAAIRA LDASCAQWRQ DVIRPLRRIR TAMKSDASLA WNPRVPALRE AIKAQELTAE
RIEAEVLDAL IRSLPPTAGP GGEKPLEEAA SLVLDLQAPD RAALLPEDAR HVCEALAGLE
KGCAST