Gene Pden_4932 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4932 
Symbol 
ID4583493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp438017 
End bp438784 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content67% 
IMG OID639772235 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_918688 
Protein GI119387654 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.686113 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACA GCTTCAAGCG GGCTTTCAGC CTGGAAGGCA AGCGTGCGCT GGTGACCGGC 
GGCGGTTCCG GGCTGGGCGA GGCGATGGCC GCCGCCATGG CCGCCGCCGG CGCCAAGGTC
ATCCTGGTCG GACGCCGCAA GGACATGCTG GAACAGGCGG CCGGCCGCAT CCCCGGCGCC
AAGGTCGAAA CCGTGGACCT GGCCGACATC GCCGCGCTCG ACGCGGCCGC GAAAGCCATC
CTGGAGCGGC ATGGCAAGAT CGACATCCTC GTGAACAATG CCGGGAACAC GATCCGCAAG
CCGTTCCTTG AGACGACATA CGAGGATATA GACGCTGTGG TCGACGTGCA TCTGCGCGGT
GCGCTGGAGT TCTCGCGCCC GATCATCGCG CGGCAGGCGG AAACCGGCGG CGGCTGTGTC
ATCTTCACCG CATCGATGGC CTCCTACATG GGCCTGCCCT ATGTGATGGG ATATACCGTC
GCCAAGACCG CCCTGCTGGG TGTCGTGCGC GCCCTTTCCG CCGAGTTCGC CGGCCAGAAC
GTCCGGGTGA ACGGCATCGC GCCGGGCTGG ATCGACACGC CGCTTTATCG CGGGGCCACG
GGTGCCGATC CCGCGCGCAA GGCCAAGGCC CTTGGCCGAA TCCAGATGGG ACGCATCGGC
GAGGTCGAGG ATGTCGGCTG GACCAGCGTA TTCCTGGCCT CGGACGCGGC CGCCTATATC
ACGGGACAGA CAGTGGCCGT GGATGGCGGA GCCCTGGCGG GTTTCTGA
 
Protein sequence
MNDSFKRAFS LEGKRALVTG GGSGLGEAMA AAMAAAGAKV ILVGRRKDML EQAAGRIPGA 
KVETVDLADI AALDAAAKAI LERHGKIDIL VNNAGNTIRK PFLETTYEDI DAVVDVHLRG
ALEFSRPIIA RQAETGGGCV IFTASMASYM GLPYVMGYTV AKTALLGVVR ALSAEFAGQN
VRVNGIAPGW IDTPLYRGAT GADPARKAKA LGRIQMGRIG EVEDVGWTSV FLASDAAAYI
TGQTVAVDGG ALAGF