Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4932 |
Symbol | |
ID | 4583493 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008688 |
Strand | + |
Start bp | 438017 |
End bp | 438784 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639772235 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_918688 |
Protein GI | 119387654 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.686113 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGACA GCTTCAAGCG GGCTTTCAGC CTGGAAGGCA AGCGTGCGCT GGTGACCGGC GGCGGTTCCG GGCTGGGCGA GGCGATGGCC GCCGCCATGG CCGCCGCCGG CGCCAAGGTC ATCCTGGTCG GACGCCGCAA GGACATGCTG GAACAGGCGG CCGGCCGCAT CCCCGGCGCC AAGGTCGAAA CCGTGGACCT GGCCGACATC GCCGCGCTCG ACGCGGCCGC GAAAGCCATC CTGGAGCGGC ATGGCAAGAT CGACATCCTC GTGAACAATG CCGGGAACAC GATCCGCAAG CCGTTCCTTG AGACGACATA CGAGGATATA GACGCTGTGG TCGACGTGCA TCTGCGCGGT GCGCTGGAGT TCTCGCGCCC GATCATCGCG CGGCAGGCGG AAACCGGCGG CGGCTGTGTC ATCTTCACCG CATCGATGGC CTCCTACATG GGCCTGCCCT ATGTGATGGG ATATACCGTC GCCAAGACCG CCCTGCTGGG TGTCGTGCGC GCCCTTTCCG CCGAGTTCGC CGGCCAGAAC GTCCGGGTGA ACGGCATCGC GCCGGGCTGG ATCGACACGC CGCTTTATCG CGGGGCCACG GGTGCCGATC CCGCGCGCAA GGCCAAGGCC CTTGGCCGAA TCCAGATGGG ACGCATCGGC GAGGTCGAGG ATGTCGGCTG GACCAGCGTA TTCCTGGCCT CGGACGCGGC CGCCTATATC ACGGGACAGA CAGTGGCCGT GGATGGCGGA GCCCTGGCGG GTTTCTGA
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Protein sequence | MNDSFKRAFS LEGKRALVTG GGSGLGEAMA AAMAAAGAKV ILVGRRKDML EQAAGRIPGA KVETVDLADI AALDAAAKAI LERHGKIDIL VNNAGNTIRK PFLETTYEDI DAVVDVHLRG ALEFSRPIIA RQAETGGGCV IFTASMASYM GLPYVMGYTV AKTALLGVVR ALSAEFAGQN VRVNGIAPGW IDTPLYRGAT GADPARKAKA LGRIQMGRIG EVEDVGWTSV FLASDAAAYI TGQTVAVDGG ALAGF
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