Gene Pden_4931 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4931 
Symbol 
ID4583492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp437007 
End bp438020 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content66% 
IMG OID639772234 
Productalcohol dehydrogenase 
Protein accessionYP_918687 
Protein GI119387653 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases 
TIGRFAM ID[TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGCGC TTATCATCGA AAAGGAAGGC CACACGGTCA TCGGCGACAT CGCGGAGCCC 
CGGATGGGCC CGGGTGACGT CCGGGTCCGG GTGTGCCATG TCGGGCTTTG CGGCACCGAC
TTCAACTCGT ATCGCGGGCT CAATCCGCTC GTCACGCTGC CGCGCGTGCC CGGGCACGAG
ATCGGCGGCG AGATCATCGA GGCAGGCGCA TCCGTTCCCG CCGAGTTCGC GCCCGGCCGC
CGGGTGGTCG TGGTTCCCTA TACCAATTGC GGCGAATGTT CCTCGTGCCG CAAGGGCCGG
CTGAACGCCT GCCGCTACAA CAAGACCCTG GGCGTCCAGC AGCAGGGCGG CCTGACGCGC
GAGATCGTCG TGCCGGCGGA AAAGCTTATC CCGAACGACA CGCTGCCGCC CCAGCACCTG
GCGCTTGTCG AGCCGCTGGC CGTCGGCTTC CATGCCGTCG CGCGCGGCAA GGTCGGCGCG
GGCGATACGG TCGTGGTGCT GGGGTGCGGC ATGATCGGCA TGGGCGTCCT GATCGGCGCG
GCGGCGCGGG GCGCCCGGAT CGTGGCCGTG GACATGAGCG CGCAGAAGCT GGACCTGGCC
CGCCGTTTCG GCGCGGCGGT CACGCTGAAC CCCTCCGAAC AGGATGTCGA GCAAACCGTC
GCGGAACTGA CCGGCGACCT GGGCGCGGAC GTGGTCTTCG AGGCGGTGGG CACGCCCGCG
ACCTTCACCC AATGCATCGC GCTGGCGGGC TATGCGGGAC GCGTGGTCTA TGTCGGCTAT
TCCAAGGCGC CTGTCAGCTA CGACACGGCC TTCTTCAACC TCAAGGAACT GGACATCCTG
GGCTCGCGCA ATGCGACGAT GCAGGATTTC AGGGACGTCA TCGCCCATCT GGAAAAGATC
GGCGACATGG CGGACCTGCT GATCTCGAAG GTCTTCCCCT TCTCGCAGGC GGATCAGGCA
TTCCCCTATT GGAACGACAA TCGCGACAAT CTCAAGGTGA TGGTGGCACT ATGA
 
Protein sequence
MKALIIEKEG HTVIGDIAEP RMGPGDVRVR VCHVGLCGTD FNSYRGLNPL VTLPRVPGHE 
IGGEIIEAGA SVPAEFAPGR RVVVVPYTNC GECSSCRKGR LNACRYNKTL GVQQQGGLTR
EIVVPAEKLI PNDTLPPQHL ALVEPLAVGF HAVARGKVGA GDTVVVLGCG MIGMGVLIGA
AARGARIVAV DMSAQKLDLA RRFGAAVTLN PSEQDVEQTV AELTGDLGAD VVFEAVGTPA
TFTQCIALAG YAGRVVYVGY SKAPVSYDTA FFNLKELDIL GSRNATMQDF RDVIAHLEKI
GDMADLLISK VFPFSQADQA FPYWNDNRDN LKVMVAL