Gene Pden_4930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4930 
Symbol 
ID4583491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp436286 
End bp436948 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content70% 
IMG OID639772233 
Product2-dehydro-3-deoxy-6-phosphogalactonate aldolase 
Protein accessionYP_918686 
Protein GI119387652 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase 
TIGRFAM ID[TIGR01182] Entner-Doudoroff aldolase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACGC AAACCGGAGT GCCGCATATG TCCTTCCCTG CCCTGAACCT GCCCATCGTC 
GCCATCCTGC GCGGCATCCG GCCCGACGAG GCCGAGGCGG TCACCCACGA ACTGCTCGAC
GCCGGGTTGC AGGCCATCGA GGTTCCGCTG AACTCGCCCG ACGCCTTTCG CTCGATCGAG
ATCGCGGCGA AACTTGCGCC CGAGGGCGTG CTGATCGGCG CCGGAACCGT CACCCGCGCC
GAAGAGGTCG CGAGCCTGCA TGATGCGGGC GGGAGGCTGC TGGTCTCGCC CAATATCGAC
GATGCGGTGA TGGAGGCCGC GCGCGGCCTC GGCATGGTGA CGATGCCCGG TGTCCTGACG
CCCACCGAGG CACTGAGGGC GCTGCGGCTT GGCGCCTCGG CGCTGAAGTT CTTCCCGGCC
AGCGTGCTGG GTCCCTCCGG CATCTCGGCG ATCCGCACCA TCCTGCCGCC CGATGCCACC
ATCGCGGCGG TCGGCGGCGT CGGAGAAGAG AATTTCGCCA GCTATCTGGC CGCGGGCGTC
TCGGCCTTCG GGATCGGCTC GAACCTTTTC CGCCCCGGCC TGTCGGCCAG CGAGGTCGGC
GCCCGGGCGC GCAGCATCGT CGCGGCCTAC ACGGCTGCCG CGCGCTCGGT GCAAAAGGGC
TGA
 
Protein sequence
MTTQTGVPHM SFPALNLPIV AILRGIRPDE AEAVTHELLD AGLQAIEVPL NSPDAFRSIE 
IAAKLAPEGV LIGAGTVTRA EEVASLHDAG GRLLVSPNID DAVMEAARGL GMVTMPGVLT
PTEALRALRL GASALKFFPA SVLGPSGISA IRTILPPDAT IAAVGGVGEE NFASYLAAGV
SAFGIGSNLF RPGLSASEVG ARARSIVAAY TAAARSVQKG