Gene Pden_4929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4929 
Symbol 
ID4583490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp435375 
End bp436289 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content71% 
IMG OID639772232 
Product2-keto-3-deoxy-galactonokinase 
Protein accessionYP_918685 
Protein GI119387651 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3734] 2-keto-3-deoxy-galactonokinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.876987 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACTC ACAGCACCCC CCGCTTCGCG GCGGTCGATT GGGGCACCAG CAGCTTCAGG 
ATCTGGCTTG TCGATGCAAG GGGACAAATC CTTGCCGAAC GCCGCAGCGC CGAGGGCATG
ACCGTGGCCC GCGAGACGGG CTTTCGCAAG ATCCTCGACG GCCACCTTGC CGCGATGCAG
GCCCCCCAGG ACCTGGGCGT CGTCATCTGC GGCATGGCCG GCGCGCGGCA GGGCTGGGTC
GAGGCCGGCT ATCTCGACTG CCCCGCGCCG CTGGACGCTC TGGCGGCGCG GGCCATCCGC
GTCGGGCACG AAACCCGGGA CATCCGCATC CTGCCCGGCG TGGCGCAGCG CGATGCCGAT
CATCCCGACG TCATCCGGGG CGAGGAAACC CAGCTTCTGG GCCTCGCGCA TGGTGAGGGC
GCGCTGACGG TGGTGATGCC CGGGACGCAT TCGAAATGGG TGCGGCTGGA GGGGACCACC
CTGGCCGGTT TCGCAACCCA CATGACCGGC GAGATCTTCC AGGCGCTGAC CAGTGCGACC
CTGCTGAAGC ACGCGGTCGA GGGCGCCACG GGCCGGCGCG ACCACGCCGC GTTCCGTGCC
GGGGTCCGCG AGACGTTCGC CGCGCCGGCC GGCTGGTCCA GCCGGTTGTT CGAGGTGCGC
GGCCGCCAGC TCCTGTTCGG GGCGGATGCC GATGCCGCAA GGGACCGGAT TTCCGGCATC
CTGATCGGCG CCGAGATCGC CGCGGGGCTG GCGCAGGGTG CGGGCGGATC GCCCCTCCGC
ATCCTCGCCT CGGGCCGGCT CGCCGATCTT TATATCGAAG CCTTCGAACT GCTCGGCATC
GCCTTCGCCG TCGAGGATGC CGACCGCGCG ACCCTTGCCG GCCTGACCTT CGCCGCCGGC
CGGATCTGGC CATGA
 
Protein sequence
MATHSTPRFA AVDWGTSSFR IWLVDARGQI LAERRSAEGM TVARETGFRK ILDGHLAAMQ 
APQDLGVVIC GMAGARQGWV EAGYLDCPAP LDALAARAIR VGHETRDIRI LPGVAQRDAD
HPDVIRGEET QLLGLAHGEG ALTVVMPGTH SKWVRLEGTT LAGFATHMTG EIFQALTSAT
LLKHAVEGAT GRRDHAAFRA GVRETFAAPA GWSSRLFEVR GRQLLFGADA DAARDRISGI
LIGAEIAAGL AQGAGGSPLR ILASGRLADL YIEAFELLGI AFAVEDADRA TLAGLTFAAG
RIWP