Gene Pden_4926 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4926 
Symbol 
ID4583487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp432173 
End bp432907 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content64% 
IMG OID639772229 
ProductABC transporter related 
Protein accessionYP_918682 
Protein GI119387648 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCCCA TCGTTAAACT GAACAACGTC TCCAAAAGCT TCGGCAGCCT GCATGTCCTG 
CAAGGCGTGT CCTTCGACGT CGCGGCAGGC AGCGTGGTCG CCATCATCGG TCGCAGCGGC
TCGGGGAAAA GCACCGCGCT GCGCTGCATC AACGGGCTGG AAAAGATCAA CAGCGGCGAG
ATCACCGTCT GCAACCACCA CCTGCATCAC GACGTGACCC GGGCCCAGTT GCGCGCCCTG
CATCTGGACG TGGGCATCGT CTTCCAAAGC TACAACCTTT TCCCGCACCT GACCGTCGGC
CAGAACATCA TGCTGGCACC GCGCTGGGTT CGGAAGCAGT CGAAATCCGA GGCCCACGAA
CATGCCGCCG AGGTGCTGCG CAAGGTCGGG CTGGCCGAAA AGTTCGACGC CTATCCCGAG
CAGCTTTCCG GCGGCCAGCA GCAGCGGGTG GCCATCGCGC GCTCGCTGGC GATGGAGCCC
AAGCTGATGC TCTTCGACGA AGTGACCTCG GCGCTCGATC CAGAACTGAC GGGCGAGGTG
CTGAAGGTGA TGGAAAGCCT TGCCAGGGAC GGCATGACGA TGGTCCTCGT CACGCACGAA
ATGGCCTTCG CCAAGGGCGT GGCCGACAAG ATCGTCTTCA TGCACCAGGG CCGGGTCTGG
GAGGAAGGCG GCGGAGAGAT GCTGTCCGCG CCGCAGACCC CGGAACTGCG CCAGTTCGTC
GGCAACGGCC TGTGA
 
Protein sequence
MSPIVKLNNV SKSFGSLHVL QGVSFDVAAG SVVAIIGRSG SGKSTALRCI NGLEKINSGE 
ITVCNHHLHH DVTRAQLRAL HLDVGIVFQS YNLFPHLTVG QNIMLAPRWV RKQSKSEAHE
HAAEVLRKVG LAEKFDAYPE QLSGGQQQRV AIARSLAMEP KLMLFDEVTS ALDPELTGEV
LKVMESLARD GMTMVLVTHE MAFAKGVADK IVFMHQGRVW EEGGGEMLSA PQTPELRQFV
GNGL