Gene Pden_4913 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4913 
Symbol 
ID4583474 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp418848 
End bp419909 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content68% 
IMG OID639772216 
ProductABC transporter related 
Protein accessionYP_918669 
Protein GI119387635 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.801745 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGATTG ATATCCAGAA ACTGGGCGTC GCCTATGGCG ATCACCGTGT CATCGACGGG 
CTTTCGCTGA AGATCGAGCC CGGATCGTTC TTCACCCTGC TGGGCCCGTC CGGTTGCGGC
AAGACCACGC TGCTGCGCAC CATCGCGGGC TTCATCGATG CGGCGGCGGG GCGGATCCTG
TTCGGCGACA AGGATGTGAC CGGGCTGCCG GCGCATCGGC GCGACATCGG CATGGTGTTC
CAGGATTACG CCTTGTTTCC CGACAAGACC GTGAACGACA ACGTGGCCTA CGGGCTGCGG
GCGCGTGGTC AGGACGGCGC GACCATCCGG CGCAAGGTCG GCGAGGCGCT GGAGCGCGTG
GGACTGGGCC ACCTGGGCCA GCGGCATCCG GCGGCGCTGT CGGGCGGCCA GCGCCAGCGG
GTCGCGCTGG CCCGGGCGCT GGTGATCCAG CCGACGGTTC TGCTGATGGA CGAGCCGCTG
TCGAACCTGG ACGCCAAGCT GCGGGTGCAG GTGCGCGACA CCATCACCGA ATTGCAGCGC
GAGGCGGGGA TCACCACCGT CTTCGTGACC CATGACCAGG AGGAAGCGCT GGCCATGTCC
GACCGGATCG GGGTGATGAA AAGCGGCCGG CTGGAACAGG TCGGCACGCC ATCCGAGATC
TATCGCGACT CGGTCTCGTC CTATGTCGCG GATTTCGTCG GCGCGGCCAA TACGGTCGAG
ATCGACGCAC CCGGCGCGGC GCAGGGCATG GTCACCGTCG GGCTGGGCGG GCATTCGATT
TCGGCGCGCG TTCCGGCCCC CCTGGCCGGG TCCAGGGCCG TGCTGATCGC GCGTCCCGAG
GATATCGCCT TGTCCCCGCA AGGCACGGGC GGCGCCAACT GCGTGCAGGG CACCGTCAGC
CGCCGGCAAT ACCTGGGCGG CAAGACGCAT TACCTGATCG GGATCGGCGC CGATGTCGCG
CTGGCGGTCG AGACCCATGG CGACGGCCAT GACCGCTATA TGCCCGGCGC CGATGTCGAC
CTGTCCTTCG ACCCGATGAA GACCCTGGTG CTGGCGTCAT GA
 
Protein sequence
MGIDIQKLGV AYGDHRVIDG LSLKIEPGSF FTLLGPSGCG KTTLLRTIAG FIDAAAGRIL 
FGDKDVTGLP AHRRDIGMVF QDYALFPDKT VNDNVAYGLR ARGQDGATIR RKVGEALERV
GLGHLGQRHP AALSGGQRQR VALARALVIQ PTVLLMDEPL SNLDAKLRVQ VRDTITELQR
EAGITTVFVT HDQEEALAMS DRIGVMKSGR LEQVGTPSEI YRDSVSSYVA DFVGAANTVE
IDAPGAAQGM VTVGLGGHSI SARVPAPLAG SRAVLIARPE DIALSPQGTG GANCVQGTVS
RRQYLGGKTH YLIGIGADVA LAVETHGDGH DRYMPGADVD LSFDPMKTLV LAS