| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4909 |
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| Symbol | |
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| ID | 4583470 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008688 |
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| Strand | - |
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| Start bp | 413380 |
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| End bp | 414630 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639772212 |
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| Product | sarcosine oxidase beta subunit family protein |
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| Protein accession | YP_918665 |
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| Protein GI | 119387631 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | [TIGR01373] sarcosine oxidase, beta subunit family, heterotetrameric form |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.315195 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATTTCT CGGGCTTGCG GGTCATCAGA GAGGCGCTGA CCGGGCACAA GGGGTGGAAG
CCGCTATGGC GCAACCCCGA GCCGCAGCCG GCCTATGACT ACATCATCGT CGGCGGCGGC
GGGCATGGGC TGGCGACGGC CTATTACCTC GCCAAGACAT TCGGCCGCGC GCGCATCGCC
GTGCTGGAGA AAAGCTGGCT CGGCTCGGGC AATATCGGGC GGAACACCAC GATCATCCGC
TCGAACTACC TGCTGCCGGG CAACGAGCCC TTCTACGAGT TCTCGATGAA GCTTTGGGAG
GGGTTGGAGC AGGAGTTCAA CTTCAACGCC ATGGTCAGCC AGCGCGGCAT CCTGAACCTG
TGCCATACGG ATGCGCAGCG CGATGCCTTC CGCCGGCGCG GCAACGCCAT GCTGCTGGCG
GGCGCGGATG CCGAGTTGCT GGACCGCGAG CAGGTCCGGG CCATGGCGCC GTTCCTGAAC
TTCGACAATG CCCGCTTCCC GATCAAGGGT GGGTTGTTGC AGCGCCGGGC GGGGACCGCG
CGCCATGACG GCGTGGCCTG GGGCTATGCC CGCGGCGCCG ACATGCGCGG CGTCGACTTG
ATCCAGAACT GCGAGGTCAC CGGCTTTCGC ATCGACGGCG GCCGGATCAG CGGGGTCGAG
ACGACGCGCG GCTATATCGC CGCCGGCACG GTCGGCGTGG CGGTGGCGGG CTCGTCCAGC
CGGGTCATGG CCATGGCGGG GATGCGGCTG CCCATCGAAA GCCATGTGTT GCAAGCCTTC
GTTTCCGAGG GGCTGAAGCC CACCATCCCG GGCGTCATCA CCTTCGGCGC CGGGCATTTC
TACGTCAGCC AGTCCGACAA GGGCGGGTTG GTCTTTGGCG GCGACATCGA CGGCTACAAC
TCCTATGCTC AACGCGGCAA CCTGCCGGTG ATCGAGGACG TGGCCGAGGG CGGCATGGCG
CTGATGCCGA TGATCGGCCG GGCGCGGCTG CTGCGCGTCT GGGGCGGCAT CATGGACATG
TCCATGGACG GCAGCCCGAT CATCGACCGC ACGCCCGTCG AGGGGCTCTA TCTGAATGCC
GGCTGGTGCT ATGGCGGCTT CAAGGCGACG CCCGCCAGCG GCTATGCCTT TGCCCATCTG
CTGGCCACCG GCCGCCCGCA CGAAACCGCA AGCGCCTATC GCCTGGACCG TTTCACGCGC
GGCTATGTCA TCGACGAAAA GGGCGTGGGT GCCCAACCGA ACCTGCATTG A
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| Protein sequence | MHFSGLRVIR EALTGHKGWK PLWRNPEPQP AYDYIIVGGG GHGLATAYYL AKTFGRARIA
VLEKSWLGSG NIGRNTTIIR SNYLLPGNEP FYEFSMKLWE GLEQEFNFNA MVSQRGILNL
CHTDAQRDAF RRRGNAMLLA GADAELLDRE QVRAMAPFLN FDNARFPIKG GLLQRRAGTA
RHDGVAWGYA RGADMRGVDL IQNCEVTGFR IDGGRISGVE TTRGYIAAGT VGVAVAGSSS
RVMAMAGMRL PIESHVLQAF VSEGLKPTIP GVITFGAGHF YVSQSDKGGL VFGGDIDGYN
SYAQRGNLPV IEDVAEGGMA LMPMIGRARL LRVWGGIMDM SMDGSPIIDR TPVEGLYLNA
GWCYGGFKAT PASGYAFAHL LATGRPHETA SAYRLDRFTR GYVIDEKGVG AQPNLH
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