| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4891 |
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| Symbol | |
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| ID | 4583452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008688 |
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| Strand | + |
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| Start bp | 394418 |
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| End bp | 395980 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639772194 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_918647 |
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| Protein GI | 119387613 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.862065 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.74496 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATATCG CCCGCATTCT CGAGGCTTCC GCCGACCGCT ACCCGGATCA TCTTGCGCTG
GTCTTCGAGG ACAGGCGCTG GACCTATGCC GAATGGCTGG CCCGCGTCCG CCGCTTTGCG
CAGGCGCTGT CGGATCTGGG GGTGCGGCCG GGGGACCGCG TGGCCTTCTA TGTCTCGACC
TCGGAAAACT CGGTGACGAC CTATTTCGCC TGCCAGATGC TGGGCGCGGT GGCGGTGCCG
ATGAACTTTC GCCTTTCGGC GGGCGAGGCC GCCCACATCC TGCAGGATTC CGGCGCCCGC
GTGCTGATCT ATGGCCGCAG CCTGACCGGG AACGTCGAAC GGATCGCGGC GCAGATGCAT
TCGATCCACG ATTTCATCGG CTGCGCCTAC GACCGGGCAC ATATCCCCGC CGGCCACCTG
CATTTCGAAA CCCTGGCCGA GCAGACCGCG GATCGCGACG AGCCGCGCAT CATTCCCTCG
GGGGATGCGA TTTCCTCGCT GGTCTATACC TCGGGGACGA CCGGGCGGCC CAAGGGGGTG
ATCCACACCC ATGCCAACGA CATCGCCATC GCGATGAACT GCGTCATGGA ATATTCGCTG
AACCATACCG ACAATGCGCT GCATATCGCG CCGCTTTACC ATGTGGGCGG CATGCAAGCC
TATTTCATTC CGCATCTGCT GGTCGGCGGC ACCAATGTCG TGATCGGCCG CTACGAGGCA
GAAAAGACGC TGGACACCAT CGCGGCCGAG CGCATCACCA CGCTGTTCGC CGTGCCCACC
CAAATCCAGG AGATGCTGTT TCACCCGCGC TTCCGCGATC AGGACCTCAC TTCGCTGCGG
CTGATCACCA CCGGCGGCGC GGCCATTTCC GCCGCGACGA TGGAACGGGT GATGGCCGAG
TTCTGCCCGG CGATCTTCAA CGGCTACGGC ATGACCGAAG CGTCGCTGAC GCTGGTGCTG
CATCCGCAGG ACGCGCTGCG CAAGCTGGGA TCCTGCGGCA AGCCGACGCT GATTTCGGAA
TGCCGGATCG TGACCGACGA TCCCATGCGC GAGGTGCCGC CCTCGGAAAC CGTGCCGCGC
GGACAGGTGG GCCAGCTGAT CGTGCGCGGC CCGCAGGCGA TGCAGGGCTA TTGGAACAAC
CCGTTCGAGA CGCAGAAGAA GCTGAAGGCA GGCTGGATCT ATACGGGCGA CCTGTTCAGC
CAGGACCGGG ACGGGTTCTA TTATTTCCAC GGCCGGGCCG ACGACATGAT CGTCTCGGGC
GGCGAGAACA TCCATCCGCG CGAGGTCGAG GAGATCCTCT ATCGCTGCCC CGGCGTGCAG
GAGGTGGCAG TCGTCGGGCT GGCGGACGAG AAATGGGGCC AGGCGGTGAC GGCCTTCGTC
GTCCGCTCGG ACCCGGCGCT GAGCGCGCAG GACCTGGATG CGTTCTGCAA GGCCAGCGAC
GCTCTGGCGC CCTACAAGCG GCCCCGCCGA TACGAGTTTC TGGAAAGCCT GCCGCTGAAC
CCCAGCGGCA AGGTGCTCCG GCGCGAACTG GTCGCGCGCC ATGCCCCGCA GCCGGCCTGC
TGA
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| Protein sequence | MHIARILEAS ADRYPDHLAL VFEDRRWTYA EWLARVRRFA QALSDLGVRP GDRVAFYVST
SENSVTTYFA CQMLGAVAVP MNFRLSAGEA AHILQDSGAR VLIYGRSLTG NVERIAAQMH
SIHDFIGCAY DRAHIPAGHL HFETLAEQTA DRDEPRIIPS GDAISSLVYT SGTTGRPKGV
IHTHANDIAI AMNCVMEYSL NHTDNALHIA PLYHVGGMQA YFIPHLLVGG TNVVIGRYEA
EKTLDTIAAE RITTLFAVPT QIQEMLFHPR FRDQDLTSLR LITTGGAAIS AATMERVMAE
FCPAIFNGYG MTEASLTLVL HPQDALRKLG SCGKPTLISE CRIVTDDPMR EVPPSETVPR
GQVGQLIVRG PQAMQGYWNN PFETQKKLKA GWIYTGDLFS QDRDGFYYFH GRADDMIVSG
GENIHPREVE EILYRCPGVQ EVAVVGLADE KWGQAVTAFV VRSDPALSAQ DLDAFCKASD
ALAPYKRPRR YEFLESLPLN PSGKVLRREL VARHAPQPAC
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