| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4889 |
|---|
| Symbol | |
|---|
| ID | 4583450 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008688 |
|---|
| Strand | + |
|---|
| Start bp | 392278 |
|---|
| End bp | 393198 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639772192 |
|---|
| Product | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase |
|---|
| Protein accession | YP_918645 |
|---|
| Protein GI | 119387611 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0388] Predicted amidohydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.938763 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.674247 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCCCT GCCCTCGGGG TGGCGATGCG GAAGGGCCGA AGGCGATGAC GACCAACAAG
ACGATCACCA TCGGCGCCGC GCAATTCTCC AGCGAGATCG GCGATGTCGA CGCCAACCTG
GACCGCCACC TGCACTGGAT CGCGCGAGGG CGCGAGGCCG GTCTGGACAT GCTGGTCATG
CCGGAGCTGT CGCTGACCGG CCATTACGGC TCCGAGAACC TGCTCGACGC CGCCATGTCG
CGCAAGGATC CGCGGCTGAA GCGGCTGGCC GAGGCGGCGG GACCGATGGC CGTGACGCTG
GGCTTCATCG AGGAAGGACC GGCCGCGCAA TTCTACAACG CAGCCGCGAT CCTGTGCGAC
GGGCGGATGA TCCATCTGCA CCGCAAGGTG AACCTGCCCA CCTATGGCAA GCTGGAAGAG
GGCAAGCATT ACGCGCCCGG CCGCTTCGTC GAGACCTGCG AACTGGATGG GTATTGGCGC
GCGGGCCTGC TGATCTGCGC CGATGTCTGG AACCCGGCGC TGACCCACCT GGCCTTTCTG
CATGGCGCCA CCCTGCTGAT CTGCCCGGTC AGTTCCGGCG AGGAGGCGGT AGGCGTCGAT
TTCGACAATC CCGGCGGCTG GGCGCTGACC TGCCGGTTCT ATGCAATGAT CTATGGCGCT
CCGGTCGTCA TGGTGAACCG CACCGGGACC GAGCGCGACC TGACCTTCTG GGGCGGTTCG
CGCATCATCG ATCCCTTCGG GCGCGCACTG GCCGTAGCCG GTTCCGGCGA AGAGATGATC
ACCGCGACGC TGGATTATGA CGTGCTGCGC CGTGCGCGCC ACCTGCTGCC CACCGTGCGC
GACAGCAATC TGGCGCTGGT CCAGCGCGAG ACGGCGCGGC TGATCGACAC GTTGGGCGTC
CCGGATTTCG TCCGCGAATG A
|
|---|
| Protein sequence | MRPCPRGGDA EGPKAMTTNK TITIGAAQFS SEIGDVDANL DRHLHWIARG REAGLDMLVM
PELSLTGHYG SENLLDAAMS RKDPRLKRLA EAAGPMAVTL GFIEEGPAAQ FYNAAAILCD
GRMIHLHRKV NLPTYGKLEE GKHYAPGRFV ETCELDGYWR AGLLICADVW NPALTHLAFL
HGATLLICPV SSGEEAVGVD FDNPGGWALT CRFYAMIYGA PVVMVNRTGT ERDLTFWGGS
RIIDPFGRAL AVAGSGEEMI TATLDYDVLR RARHLLPTVR DSNLALVQRE TARLIDTLGV
PDFVRE
|
|---|
| |