| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4881 |
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| Symbol | |
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| ID | 4583442 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008688 |
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| Strand | - |
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| Start bp | 385533 |
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| End bp | 386534 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639772184 |
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| Product | substrate-binding region of ABC-type glycine betaine transport system |
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| Protein accession | YP_918637 |
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| Protein GI | 119387603 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.730601 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.999131 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGATGC TCAGGACTAT CCTTGCGGCT GCGCTGGTGG CGGGCGCGAC GCCCGCGGCG
GCCGAAACCG TCAAGATCGC GATCGGCGGT GCCAGCTGCG TCTGCTACAT GCCCGTCGTT
CTGGCCGAAC AGCTGGGCCT TTACGAAAAG CACGGGGTCG ATGTCGAACT GGTGGACTTC
AAGGGCGGCT CGGCGGCGCT GAAGGCGGTG GTCGGCGGCA GCGCGGACGT GGTTTCGGGC
TATTACGAAC ACACCATCAC GCTGGCGGCC AAGCGGCAGG AGCTGTCCTC GTTCGTGCTG
ATGGGGCGGC TGCCCGGCAT CGCCGTGGCC GTGGCGCCCG GCAAGACGGA CGAGGTCAAG
TCGATCAAGG ATCTTGCCGG CAAGACCGTC GGGATCAGCG CGCCGGGTTC CTCGACCGAC
TTCTTCCTCA AATACATGCT GTCGCAGGCC GGGCTGGACC CGAATGCCGC CTCGGTCGTC
GGGGTCGGCG TCGGCGCCAC CGCGGTCGCG GCGCTTGAGC AGGGCCGGAT CGACGCGGTG
GTCACGCCCG ATCCGGCGAT CACCCAGTTG CAGAGCCGGC ACGCCGACCT GCCCATCCTG
GTCGATACCC GCAAGGCGGC GGATACCCAC GCCCTGTTCG GCGCCGATTA CCCCGGCGCG
GCGCTTTATA CCCGCACGGA ATGGCTCGAC CAGCATCCCG AACAGGCCCA GGCGCTGGCC
GCCGCCATCG TCGAGACGCT GGAATACATC CACAACACCC CCGCCGAGGA GATCGCGGCG
AAGATGCCGC CCAACCTGGT CGGTGCGGAC AAGCAGGTCT ATATCGAATC GCTGAACAAC
AGCATGGAAA TGCTGTCGGA AACCGGGCTG GTGGATGCGA AGGGCGCCGA AGCGGTGCAG
ACGATGCTGA GCTTCAACCT GCCCGAGGTG GCCGGCGCCA CCATCGACCT CGGCAAGACC
TATACCAACG CCTATGTCGA AAAGGTCTCG GCGCAGCAGT AA
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| Protein sequence | MTMLRTILAA ALVAGATPAA AETVKIAIGG ASCVCYMPVV LAEQLGLYEK HGVDVELVDF
KGGSAALKAV VGGSADVVSG YYEHTITLAA KRQELSSFVL MGRLPGIAVA VAPGKTDEVK
SIKDLAGKTV GISAPGSSTD FFLKYMLSQA GLDPNAASVV GVGVGATAVA ALEQGRIDAV
VTPDPAITQL QSRHADLPIL VDTRKAADTH ALFGADYPGA ALYTRTEWLD QHPEQAQALA
AAIVETLEYI HNTPAEEIAA KMPPNLVGAD KQVYIESLNN SMEMLSETGL VDAKGAEAVQ
TMLSFNLPEV AGATIDLGKT YTNAYVEKVS AQQ
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