| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4878 |
|---|
| Symbol | |
|---|
| ID | 4583439 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008688 |
|---|
| Strand | - |
|---|
| Start bp | 382304 |
|---|
| End bp | 383257 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639772181 |
|---|
| Product | pyruvate carboxyltransferase |
|---|
| Protein accession | YP_918634 |
|---|
| Protein GI | 119387600 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.980177 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGGCC CCGTATCCGC CACCGGCCGG CAGGTTTCCG TGACCGAGGT TTCGCCGCGC
GACGGCCTGC AATCCGAAAA GGTCTTCGTC CCGACCCAGG ACAAGATCCG GCTTGTCGAA
AGCCTTGTCG CGGCGGGCAT CCGTTCGGTC GAGCTGACAT CCTTCGTATC GCCGCGCGCC
GTGCCGCAGA TGCGCGATGC GGCCGAGCTG GTGCGGCATT TCCGGGGTCG CGCCGGTGTC
CGCTTCAGCG CGCTGGTGCC GAACCTGCGC GGTGCCGAAG CCGCCATCGA GGCGGGAATC
GATGCCGTCG TGATGTTCGC CTCGGCTTCG GAAAGCCACA ACCTGAAGAA CGTGAACCGC
TCGCGCGCCG ACTCGATGGC CGGGTTTCGG CAGATCGCGC GCATCGCCGA AGAGGCAGGC
GTCGCGCTGC ACGGCGCCAT CGCCACGGCC TTCGGCTGCC CCTTCGAAGG CGACGTGCCC
GTCGGCAACC TGGTCGACCA GGCCAGGCGG TATCGCGACC TCGGCATCTC GCGGATCACG
CTGGGGGACA CGACCGGGAT GGCGACGCCG GGCAATGTCG TGCCGGTGCT CGATGCGCTG
CGGACGGCGG TTCCCGAGGT GGGGATCGCG CTTCATTTCC ACAATACGCG CGGCGTCGGC
CTTGCCTGCG CCTATGCCGG CCTGCTGCAC GGAATCCGCG ATTTCGAGGC CAGCGTGGGC
GGGATCGGCG GCTGTCCGTT CGTGCCGCGC GCGACCGGCA ATATCGCCAC GGAGGATTTC
GTCTACATGT GCGAGGAATC CGGCTTTCCG ACCGGGATCG ACCTTGGCAA GCTGATCGAG
GCAGCCGGGA CAGCCGAGCG GATTCTGGGC AGGGAACTGC CCGGCCAGGT CATGAAGGCC
GGGCCGCGCC TGGCGCTTTC CAGCATGGAC GTGGTCAGGA CGGCCAATGG CTGA
|
|---|
| Protein sequence | MAGPVSATGR QVSVTEVSPR DGLQSEKVFV PTQDKIRLVE SLVAAGIRSV ELTSFVSPRA
VPQMRDAAEL VRHFRGRAGV RFSALVPNLR GAEAAIEAGI DAVVMFASAS ESHNLKNVNR
SRADSMAGFR QIARIAEEAG VALHGAIATA FGCPFEGDVP VGNLVDQARR YRDLGISRIT
LGDTTGMATP GNVVPVLDAL RTAVPEVGIA LHFHNTRGVG LACAYAGLLH GIRDFEASVG
GIGGCPFVPR ATGNIATEDF VYMCEESGFP TGIDLGKLIE AAGTAERILG RELPGQVMKA
GPRLALSSMD VVRTANG
|
|---|
| |