| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4874 |
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| Symbol | |
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| ID | 4583435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008688 |
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| Strand | + |
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| Start bp | 377124 |
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| End bp | 378206 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639772177 |
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| Product | spermidine/putrescine ABC transporter ATPase subunit |
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| Protein accession | YP_918630 |
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| Protein GI | 119387596 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.544883 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.368971 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACTT TGGAAACGCA GGGCCTGGGC AAGGTCTATG GCGACTTCGT CGCCCTTGCA
CCGACCGACC TGAAGGTCGA GAAGGGCGAG TTCCTGACGC TGCTGGGGCC GTCCGGCTCG
GGCAAGACCA CGCTGCTGAG CCTGATCGCC GGGCTGGCCG AGGCCGACAG CGGGCGCATC
CTGATGAACG ACCGGGACGT GACCCATGCC GCGCCCTATC AGCGCGACAT CGGCATGATG
TTCCAGAACT ATGCGCTGTT CCCGCACATG ACCATCGCCG AGAACATCGC CTTTCCGCTG
AAGATGCGCG GCACGCCTGC GGCCGAGATC AAACGGCTGG TGCAGGAGGC ACTGGACATG
GTGCGCCTGC CCCATATTGC GGACCGTTTC CCCAAGGAGC TGTCCGGCGG ACAGCAGCAG
CGCGTGGCCC TTGCGCGCTG CACCATCTAT CGCCCCTCGG TCATCCTGAT GGACGAGCCG
CTGGGCGCGC TGGACAAGAA GCTGCGCGAC CAGATGCAGT TCGAGATCCT GCGCATCCAC
AAGGAGATCG GCGGCACCAT CGTCTATGTC ACCCACGACC AGGAAGAGGC GATGACCATG
TCGGACCGCA TCTGCCTGAT GAACGGCGGC AGGATCGCAC AGCTGGGCAG CCCGGCCGAC
CTGTATTTCC GTCCGCAATC GCTGTTCGTC GCCGATTTCC TGGGCGAGGC GAACCTGCTG
GAGGGCCGCC TCGTCTCGGG CGCGGACGGC GAGGGCGTGG TGCGGCTGGG CGATGCCAGC
GAGATCCGCG TCACCCTGCC CCGGCCGCTG GACCATGGCG CGGCGGTCAA GGTCATGCTG
CGGCCGCAGA ACATCCGCCT TGAGGACACG CCTGGCGAGG GGCTGAACGC CAGGCTGCGC
AGCTGGAGCG TGACCGGCGC CAGCACCAAG TTCTTCCTCG ACGCGCCGGC GCTGGGGTCC
GAGCCGCTGA TCGCCACCCG CGCCACCGCG ATGAGCCATG ACGCGCCCGA GCCCGGCCGC
GACTATCGCC TGAGCTTCGA TCCGCGCGAC GCCGTCGCCA TCCCCGCCGA CGAGGCCGCC
TGA
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| Protein sequence | MSTLETQGLG KVYGDFVALA PTDLKVEKGE FLTLLGPSGS GKTTLLSLIA GLAEADSGRI
LMNDRDVTHA APYQRDIGMM FQNYALFPHM TIAENIAFPL KMRGTPAAEI KRLVQEALDM
VRLPHIADRF PKELSGGQQQ RVALARCTIY RPSVILMDEP LGALDKKLRD QMQFEILRIH
KEIGGTIVYV THDQEEAMTM SDRICLMNGG RIAQLGSPAD LYFRPQSLFV ADFLGEANLL
EGRLVSGADG EGVVRLGDAS EIRVTLPRPL DHGAAVKVML RPQNIRLEDT PGEGLNARLR
SWSVTGASTK FFLDAPALGS EPLIATRATA MSHDAPEPGR DYRLSFDPRD AVAIPADEAA
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