| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4873 |
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| Symbol | |
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| ID | 4583434 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008688 |
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| Strand | + |
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| Start bp | 376018 |
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| End bp | 377100 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639772176 |
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| Product | putative spermidine/putrescine transport system substrate-binding protein |
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| Protein accession | YP_918629 |
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| Protein GI | 119387595 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.987187 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.365367 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAAAC CCACCATGCC GACGATCAAG CGTCGGACCC TTCTGCTGGG GGCGGCCGCA
GGGCTGGCCG CGCCGGCGAT CTGGCGCCCC TCGGGTGCGC GCGCCCAGTC CACCCGCATC
GTGGTGCGCG ACGACGGCGG CATCTATACC CAGGCCTATA CCGAGATCTT CTATCGCCCC
TTCACCGAGG CGACCGGAAT CGAGGTCGTG CCCGCCCAGG CCCAGGCCGA ACCGACCGCG
CAGATCCGCT CGATGGTGGA AACCGGGACC TATACCTGGG ACATGGGCAA GATCTCGGTC
CCGGCGGTGC TGCAGCTGAC CACGGGCGAG ACCAAGTATC TGGAACCCGT GGGCCTGGAT
GCCGAGGCGG TGATCCAGTC GATCCCGGCG CATTTCCGCA ACGAATACCA GGTCGGCACC
AACGTCTATA CCACCGTGCT GGCCTATCGC CGCGACGCCT TCGAGGGGCG CGAGGCGCCG
GCCTCCTGGG CGGACCTGAT GGACCCCGAA AAGTTCCCCG GCCGCCGCGC CCTGCGCCGC
CACCCCTATG ACACGCTGGA ACAGGCGCTG ATGGCCGACG GCGTGCCTGC GGACCAGGTC
TATCCGCTGG ACCTGGACCG CGCATTCGCC CGGCTGGACA AGGTGCAGCC CGCCACCGAC
ATCTGGTGGA CCAGCGGCGC GCAGGCCGAA CAGCTGCTGA TCTCGGGCGA GGTCGACCTG
ATCTCGACCT GGGTGTCGCG CGCGCAATCG GCGCAGGCGG CCGGCGCCCC GGTCGAGATC
GTCTGGAACC AGAACATCTG GGGCTGCGAC GGCTGGTCGA TCCTGAAGGG CACGCCCAAT
GCCGATGCCT GCCGCGAGCT GATCAAGTTC GCCTCGGACC CGGCGCGCAT GGCGCAACTG
GTCAAGTTCT TCCCGGCCGG CATCGTCCAG CCGGCTGCCT TCGAGACCAT CCCGGCGGAC
GTGGCCAGGA ACTGCCCGAC CTATCCGGCG AACATCGAGA CCGGGCTGCA GATCGACGCC
GCCTATTGGC TGGAGAACGC CGACCCGGTG ATCGAGCGGT TCAACAGCTG GTTCATCGGC
TAG
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| Protein sequence | MTKPTMPTIK RRTLLLGAAA GLAAPAIWRP SGARAQSTRI VVRDDGGIYT QAYTEIFYRP
FTEATGIEVV PAQAQAEPTA QIRSMVETGT YTWDMGKISV PAVLQLTTGE TKYLEPVGLD
AEAVIQSIPA HFRNEYQVGT NVYTTVLAYR RDAFEGREAP ASWADLMDPE KFPGRRALRR
HPYDTLEQAL MADGVPADQV YPLDLDRAFA RLDKVQPATD IWWTSGAQAE QLLISGEVDL
ISTWVSRAQS AQAAGAPVEI VWNQNIWGCD GWSILKGTPN ADACRELIKF ASDPARMAQL
VKFFPAGIVQ PAAFETIPAD VARNCPTYPA NIETGLQIDA AYWLENADPV IERFNSWFIG
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