Gene Pden_4868 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4868 
Symbol 
ID4583429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp371084 
End bp371782 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content65% 
IMG OID639772171 
ProductGntR family transcriptional regulator 
Protein accessionYP_918624 
Protein GI119387590 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.37214 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAGA CAGAGACCTT CCCCGAGCGC AGGCGCGGAT CGGGCGTCAA GCTGGTCTAT 
GACCTGCTGC GCGACGAAAT CCTGGACCTG GTGCTGCCGC CGGGCAGCCC CATCGACGAG
GTGCAACTGG CCGAACGCTT CGGCATGTCC CGGACGCCGA TCCGGGAGGC TCTGGTGCGC
CTGGCGGGCG AGGGGCTGGT CGAGACGCTG CCGAACCGCT CGACCATGGT CGCCAATATC
GACTTTCTCA ACATGCATAC GTTCTTCGAC GCCCTGACGC TGATGTATCG CGTGACTACC
AGGCTGGCGG CGAGCTATCA CCAGCCCGCC GATCTGGAGA TCATCCGCGA GCATCAGGCC
AGGTTCACCG CTGCGGTCGA GGCGCAGGAT GCGTTGGCGA TGATCGCCTC CAATCGCGAC
CTGCATGCGG CCATCGCCGA GGCCGGCCGC AATCCCTATT ACCTCAGCCT GTTCCTGCGC
CTTCTGGACG AAGGGCGCCG CCTTTTGCGG CTGTATTACC AGTCGTTCAA CGACCGCCTG
CCGCGTGAAT ATGTCGATGA ACACGAAGCG ATGATCGCGG CGATCGAGGC GCGGGATGTC
GAGCTGTGCG ACCGGCTGGC AAAGGCGCAT GCGGACCAGA TCGTCCGCCA GATCCAGCAG
TTCCTGGCCC GCGACCAGCG GCAGTCCTTG CCGCTGTAG
 
Protein sequence
MAETETFPER RRGSGVKLVY DLLRDEILDL VLPPGSPIDE VQLAERFGMS RTPIREALVR 
LAGEGLVETL PNRSTMVANI DFLNMHTFFD ALTLMYRVTT RLAASYHQPA DLEIIREHQA
RFTAAVEAQD ALAMIASNRD LHAAIAEAGR NPYYLSLFLR LLDEGRRLLR LYYQSFNDRL
PREYVDEHEA MIAAIEARDV ELCDRLAKAH ADQIVRQIQQ FLARDQRQSL PL