Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4868 |
Symbol | |
ID | 4583429 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008688 |
Strand | - |
Start bp | 371084 |
End bp | 371782 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639772171 |
Product | GntR family transcriptional regulator |
Protein accession | YP_918624 |
Protein GI | 119387590 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.37214 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGAGA CAGAGACCTT CCCCGAGCGC AGGCGCGGAT CGGGCGTCAA GCTGGTCTAT GACCTGCTGC GCGACGAAAT CCTGGACCTG GTGCTGCCGC CGGGCAGCCC CATCGACGAG GTGCAACTGG CCGAACGCTT CGGCATGTCC CGGACGCCGA TCCGGGAGGC TCTGGTGCGC CTGGCGGGCG AGGGGCTGGT CGAGACGCTG CCGAACCGCT CGACCATGGT CGCCAATATC GACTTTCTCA ACATGCATAC GTTCTTCGAC GCCCTGACGC TGATGTATCG CGTGACTACC AGGCTGGCGG CGAGCTATCA CCAGCCCGCC GATCTGGAGA TCATCCGCGA GCATCAGGCC AGGTTCACCG CTGCGGTCGA GGCGCAGGAT GCGTTGGCGA TGATCGCCTC CAATCGCGAC CTGCATGCGG CCATCGCCGA GGCCGGCCGC AATCCCTATT ACCTCAGCCT GTTCCTGCGC CTTCTGGACG AAGGGCGCCG CCTTTTGCGG CTGTATTACC AGTCGTTCAA CGACCGCCTG CCGCGTGAAT ATGTCGATGA ACACGAAGCG ATGATCGCGG CGATCGAGGC GCGGGATGTC GAGCTGTGCG ACCGGCTGGC AAAGGCGCAT GCGGACCAGA TCGTCCGCCA GATCCAGCAG TTCCTGGCCC GCGACCAGCG GCAGTCCTTG CCGCTGTAG
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Protein sequence | MAETETFPER RRGSGVKLVY DLLRDEILDL VLPPGSPIDE VQLAERFGMS RTPIREALVR LAGEGLVETL PNRSTMVANI DFLNMHTFFD ALTLMYRVTT RLAASYHQPA DLEIIREHQA RFTAAVEAQD ALAMIASNRD LHAAIAEAGR NPYYLSLFLR LLDEGRRLLR LYYQSFNDRL PREYVDEHEA MIAAIEARDV ELCDRLAKAH ADQIVRQIQQ FLARDQRQSL PL
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